RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 RIC8AQ9NPQ8 531 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 CNPY2Q9Y2B0 182 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 ABCB11O95342 1321 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 DOCK5Q9H7D0 1870 aa9.21□□□□□ -0.94
PCDH9-205ENST00000614931 MKI67P46013 3256 aaKnown RBP9.2□□□□□ -0.94
PCDH9-205ENST00000614931 BRCA2P51587 3418 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 ATP2A1O14983 1001 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 FDX1P10109 184 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 PTPREP23469 700 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 CALML3P27482 149 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 HOXA13P31271 388 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-205ENST00000614931 RGS2P41220 211 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 DNM1Q05193 864 aaKnown RBP9.2□□□□□ -0.94
PCDH9-205ENST00000614931 TRIM32Q13049 653 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 JAKMIP3Q5VZ66 844 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 SNRNP48Q6IEG0 339 aaKnown RBP9.2□□□□□ -0.94
PCDH9-205ENST00000614931 USP17L6PQ6QN14 398 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 CLEC17AQ6ZS10 378 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 PIK3AP1Q6ZUJ8 805 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 BRAPQ7Z569 592 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 CCDC12Q8WUD4 166 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-205ENST00000614931 DEFB118Q96PH6 123 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 USP28Q96RU2 1077 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 APBA2Q99767 749 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.2□□□□□ -0.94
PCDH9-205ENST00000614931 ZSCAN16Q9H4T2 348 aaPredicted RBP9.2□□□□□ -0.94
PCDH9-205ENST00000614931 C6orf50Q9HD87 102 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 HOMER2Q9NSB8 354 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 RNF146Q9NTX7 359 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 COL20A1Q9P218 1284 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 TFIP11Q9UBB9 837 aaKnown RBP9.2□□□□□ -0.94
PCDH9-205ENST00000614931 RPTORQ8N122 1335 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 PDE4DIPQ5VU43 2346 aa9.2□□□□□ -0.94
PCDH9-205ENST00000614931 ZNF236Q9UL36 1845 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 SLC15A5A6NIM6 579 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 FARP2O94887 1054 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-205ENST00000614931 TFRCP02786 760 aaKnown RBP9.19□□□□□ -0.94
PCDH9-205ENST00000614931 PDIA4P13667 645 aaKnown RBP9.19□□□□□ -0.94
PCDH9-205ENST00000614931 STAT3P40763 770 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 OAZ1P54368 228 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 GHRHRQ02643 423 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 MAP2K5Q13163 448 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 SAFBQ15424 915 aaKnown RBP eCLIP9.19□□□□□ -0.94
PCDH9-205ENST00000614931 GALNT17Q6IS24 598 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 SLC30A10Q6XR72 485 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 RIOX2Q8IUF8 465 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 REXO1Q8N1G1 1221 aaKnown RBP9.19□□□□□ -0.94
PCDH9-205ENST00000614931 MB21D1Q8N884 522 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 SHCBP1Q8NEM2 672 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 CUL5Q93034 780 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 TRERF1Q96PN7 1200 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 MOV10L1Q9BXT6 1211 aaKnown RBP9.19□□□□□ -0.94
PCDH9-205ENST00000614931 TEX13BQ9BXU2 312 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 SPATC1LQ9H0A9 340 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 PSTPIP2Q9H939 334 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 GDPD2Q9HCC8 539 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 HMX1Q9NP08 348 aaPredicted RBP9.19□□□□□ -0.94
PCDH9-205ENST00000614931 MRPL11Q9Y3B7 192 aaKnown RBP9.19□□□□□ -0.94
PCDH9-205ENST00000614931 CLIC4Q9Y696 253 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 WDR81Q562E7 1941 aa9.19□□□□□ -0.94
PCDH9-205ENST00000614931 PIK3CDO00329 1044 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 STRNO43815 780 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 CFBP00751 764 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 IGHA2P01877 340 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 HOXC6P09630 235 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 PRKAR2AP13861 404 aaKnown RBP9.18□□□□□ -0.94
PCDH9-205ENST00000614931 GNA11P29992 359 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 HSD17B4P51659 736 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 CACNB2Q08289 660 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-205ENST00000614931 GNL2Q13823 731 aaKnown RBP9.18□□□□□ -0.94
PCDH9-205ENST00000614931 GRB14Q14449 540 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 PLS1Q14651 629 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 CCL14Q16627 93 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 INF2Q27J81 1249 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 KRT25Q7Z3Z0 450 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 ANKLE1Q8NAG6 615 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 PURBQ96QR8 312 aaKnown RBP9.18□□□□□ -0.94
PCDH9-205ENST00000614931 ANO3Q9BYT9 981 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 BRMS1Q9HCU9 246 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 CTDP1Q9Y5B0 961 aaPredicted RBP9.18□□□□□ -0.94
PCDH9-205ENST00000614931 PCDHB6Q9Y5E3 794 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 IVNS1ABPQ9Y6Y0 642 aa9.18□□□□□ -0.94
PCDH9-205ENST00000614931 CCDC194A0A1B0GVG4 234 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 FIBPO43427 364 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 SLC34A2O95436 690 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 ATP2B1P20020 1258 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 MNX1P50219 401 aaPredicted RBP9.17□□□□□ -0.94
PCDH9-205ENST00000614931 MRPL12P52815 198 aaKnown RBP9.17□□□□□ -0.94
PCDH9-205ENST00000614931 CEBPZQ03701 1054 aaKnown RBP9.17□□□□□ -0.94
PCDH9-205ENST00000614931 NONOQ15233 471 aaKnown RBP eCLIP9.17□□□□□ -0.94
PCDH9-205ENST00000614931 PTPAQ15257 358 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 TKFCQ3LXA3 575 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 WDR78Q5VTH9 848 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 NSMFQ6X4W1 530 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
PCDH9-205ENST00000614931 FCHSD1Q86WN1 690 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 IL31RAQ8NI17 732 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 NPLOC4Q8TAT6 608 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 BICD2Q8TD16 824 aa9.17□□□□□ -0.94
PCDH9-205ENST00000614931 SYTL5Q8TDW5 730 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms