RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 MRPS9P82933 396 aaKnown RBP6.61□□□□□ -1.35
CPNE3-208ENST00000614678 PKN1Q16512 942 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 BLOC1S2Q6QNY1 142 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 SGMS1Q86VZ5 419 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 C11orf49Q9H6J7 331 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 ATP11BQ9Y2G3 1177 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 ASGR1P07306 291 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 PDIA3P30101 505 aaKnown RBP6.61□□□□□ -1.35
CPNE3-208ENST00000614678 LIFRP42702 1097 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 HEATR3Q7Z4Q2 680 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 AMNQ9BXJ7 453 aa6.61□□□□□ -1.35
CPNE3-208ENST00000614678 A0A1W2PQ45 241 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-208ENST00000614678 A0A1W2PQY0 241 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 TRIM43BA6NCK2 446 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 PQBP1O60828 265 aaKnown RBP6.6□□□□□ -1.35
CPNE3-208ENST00000614678 SP4Q02446 784 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 TNFAIP2Q03169 654 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 SEMA3FQ13275 785 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 HIC1Q14526 733 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 SART3Q15020 963 aaKnown RBP6.6□□□□□ -1.35
CPNE3-208ENST00000614678 NTRK3Q16288 839 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 GNASQ5JWF2 1037 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 RUFY3Q7L099 469 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 NECAB2Q7Z6G3 386 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 TRIM43Q96BQ3 446 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-208ENST00000614678 TMEM87BQ96K49 555 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 WDR11Q9BZH6 1224 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 TRIP12Q14669 1992 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-208ENST00000614678 ABCB11O95342 1321 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 GOLGA8AA7E2F4 631 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 ZBTB43O43298 467 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 EDIL3O43854 480 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 EVI5O60447 810 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 RARBP10826 455 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 AKR1A1P14550 325 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 TLK2Q86UE8 772 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 CTCFLQ8NI51 663 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-208ENST00000614678 ZSWIM6Q9HCJ5 1215 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 TET1Q8NFU7 2136 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 SYNGAP1Q96PV0 1343 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 PNMA6FA0A0J9YX94 578 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 SOX1O00570 391 aaPredicted RBP6.6□□□□□ -1.35
CPNE3-208ENST00000614678 ATP9AO75110 1047 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 EPHB4P54760 987 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 AK2P54819 239 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 FGD1P98174 961 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 ABHD16BQ9H3Z7 469 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 PXMP2Q9NR77 195 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 FBXO40Q9UH90 709 aa6.6□□□□□ -1.35
CPNE3-208ENST00000614678 DIS3Q9Y2L1 958 aaKnown RBP6.6□□□□□ -1.35
CPNE3-208ENST00000614678 WDR19Q8NEZ3 1342 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 CTDNEP1O95476 244 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 NR3C2P08235 984 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 EDNRBP24530 442 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 HSD17B4P51659 736 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 ACLYP53396 1101 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 PGM5Q15124 567 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 RTN1Q16799 776 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 HSDL1Q3SXM5 330 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 RNF20Q5VTR2 975 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 KLHDC9Q8NEP7 349 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 PDCD2LQ9BRP1 358 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 OSBPL7Q9BZF2 842 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 PRDM5Q9NQX1 630 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-208ENST00000614678 DDAH1O94760 285 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 ZNF200P98182 395 aaPredicted RBP6.59□□□□□ -1.35
CPNE3-208ENST00000614678 TLE2Q04725 743 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 SCRN1Q12765 414 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 ARHGEF16Q5VV41 709 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 SLC39A5Q6ZMH5 540 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 TRIM50Q86XT4 487 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 VPS54Q9P1Q0 977 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 REC8O95072 547 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 ZNF286BP0CG31 522 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 METAP2P50579 478 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPNE3-208ENST00000614678 RTP1P59025 263 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPNE3-208ENST00000614678 LRCH3Q96II8 777 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 SPZ1Q9BXG8 430 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 TRPV6Q9H1D0 765 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 FAM184BQ9ULE4 1060 aa6.59□□□□□ -1.35
CPNE3-208ENST00000614678 TRANK1O15050 2925 aa6.59□□□□□ -1.36
CPNE3-208ENST00000614678 FAM205CA6NFA0 338 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 DNM1LO00429 736 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 TXNP10599 105 aaKnown RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 ME3Q16798 604 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 CCDC62Q6P9F0 684 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 TRMT1LQ7Z2T5 733 aaKnown RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 AFG1LQ8WV93 481 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 AGXT2Q9BYV1 514 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 TRMT13Q9NUP7 481 aaKnown RBP6.58□□□□□ -1.36
CPNE3-208ENST00000614678 SCN5AQ14524 2016 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 STXBP3O00186 592 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 JAK2O60674 1132 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 ITGB5P18084 799 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 PDE4DQ08499 809 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 C9orf50Q5SZB4 431 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 JAKMIP3Q5VZ66 844 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 MORC4Q8TE76 937 aa6.58□□□□□ -1.36
CPNE3-208ENST00000614678 VTI1AQ96AJ9 217 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms