RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ATP8A1Q9Y2Q0 1164 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 FNBP4Q8N3X1 1017 aaPredicted RBP12.99□□□□□ -0.33
CDH5-208ENST00000614547 FAM133AQ8N9E0 248 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 KCNK9Q9NPC2 374 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 FER1L4A9Z1Z3 1794 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 ITSN1Q15811 1721 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 KRIT1O00522 736 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 SKAP2O75563 359 aaPredicted RBP12.99□□□□□ -0.33
CDH5-208ENST00000614547 EMBQ6PCB8 327 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 TBC1D1Q86TI0 1168 aaPredicted RBP12.99□□□□□ -0.33
CDH5-208ENST00000614547 DDX47Q9H0S4 455 aaKnown RBP12.99□□□□□ -0.33
CDH5-208ENST00000614547 NDST4Q9H3R1 872 aa12.99□□□□□ -0.33
CDH5-208ENST00000614547 GEMIN8Q9NWZ8 242 aaKnown RBP12.99□□□□□ -0.33
CDH5-208ENST00000614547 A0A1B0GUA9 196 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 MKRN4PQ13434 485 aaPredicted RBP12.98□□□□□ -0.33
CDH5-208ENST00000614547 CNNM4Q6P4Q7 775 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 SRBD1Q8N5C6 995 aaKnown RBP12.98□□□□□ -0.33
CDH5-208ENST00000614547 TECPR2O15040 1411 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 STK36Q9NRP7 1315 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 GOLGA6L10A0A0M3HER8 536 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 PHF20L1A8MW92 1017 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 CHUKO15111 745 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 PPP1R37O75864 691 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 GCKP35557 465 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 SNX29Q8TEQ0 813 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 CCNE1P24864 410 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 AMPD2Q01433 879 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 TRADDQ15628 312 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 NLRP10Q86W26 655 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 TEX11Q8IYF3 940 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 TMEM60Q9H2L4 133 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 ZBTB1Q9Y2K1 713 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 HEG1Q9ULI3 1381 aa12.98□□□□□ -0.33
CDH5-208ENST00000614547 PRPF3O43395 683 aaKnown RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 CTNND1O60716 968 aaKnown RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 PDHBP11177 359 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 GKAP1Q5VSY0 366 aaPredicted RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 ALS2CLQ60I27 953 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 CCDC170Q8IYT3 715 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 ADSSL1Q8N142 457 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 THOC1Q96FV9 657 aaKnown RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 MLXIPLQ9NP71 852 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH5-208ENST00000614547 C3P01024 1663 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 TARSL2A2RTX5 802 aaKnown RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 GLI1P08151 1106 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 LONP1P36776 959 aaKnown RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 ATP2C1P98194 919 aaPredicted RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 UBE4AQ14139 1066 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 CCDC152Q4G0S7 254 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 PEX26Q7Z412 305 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 ANKS4BQ8N8V4 417 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 ANKRD42Q8N9B4 389 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 PNMA1Q8ND90 353 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 CTNNBL1Q8WYA6 563 aaPredicted RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 MRRFQ96E11 262 aaKnown RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 DYNLL2Q96FJ2 89 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 TOM1O60784 492 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 ASIC2Q16515 512 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 TTMPQ5BVD1 217 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 HERC4Q5GLZ8 1057 aaPredicted RBP12.97□□□□□ -0.33
CDH5-208ENST00000614547 KRT79Q5XKE5 535 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDH5-208ENST00000614547 SAMD15Q9P1V8 674 aa12.97□□□□□ -0.33
CDH5-208ENST00000614547 MAGOHP61326 146 aaKnown RBP12.96□□□□□ -0.33
CDH5-208ENST00000614547 DHX9Q08211 1270 aaKnown RBP12.96□□□□□ -0.33
CDH5-208ENST00000614547 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 TRIM68Q6AZZ1 485 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 CCDC84Q86UT8 332 aaPredicted RBP12.96□□□□□ -0.33
CDH5-208ENST00000614547 MAGOHBQ96A72 148 aaKnown RBP12.96□□□□□ -0.33
CDH5-208ENST00000614547 JCADQ9P266 1359 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 ITIH6Q6UXX5 1313 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 AGPSO00116 658 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 PRPF6O94906 941 aaKnown RBP12.96□□□□□ -0.33
CDH5-208ENST00000614547 WDR59Q6PJI9 974 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 PTF1AQ7RTS3 328 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 VPS36Q86VN1 386 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 STAG2Q8N3U4 1231 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 MDM1Q8TC05 714 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 STAG1Q8WVM7 1258 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 LRRC45Q96CN5 670 aa12.96□□□□□ -0.33
CDH5-208ENST00000614547 USP17L3A6NCW0 530 aa12.96□□□□□ -0.34
CDH5-208ENST00000614547 USP17L4A6NCW7 530 aa12.96□□□□□ -0.34
CDH5-208ENST00000614547 ZKSCAN8Q15776 578 aaPredicted RBP12.96□□□□□ -0.34
CDH5-208ENST00000614547 NT5DC1Q5TFE4 455 aa12.96□□□□□ -0.34
CDH5-208ENST00000614547 RUFY4Q6ZNE9 571 aa12.96□□□□□ -0.34
CDH5-208ENST00000614547 TMTC3Q6ZXV5 915 aa12.96□□□□□ -0.34
CDH5-208ENST00000614547 USP17L1Q7RTZ2 530 aa12.96□□□□□ -0.34
CDH5-208ENST00000614547 PHF20Q9BVI0 1012 aa12.96□□□□□ -0.34
CDH5-208ENST00000614547 THAP9Q9H5L6 903 aa12.96□□□□□ -0.34
CDH5-208ENST00000614547 RGPD8O14715 1765 aaPredicted RBP12.96□□□□□ -0.34
CDH5-208ENST00000614547 ANO9A1A5B4 782 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 SMCO2A6NFE2 343 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 MPHOSPH10O00566 681 aaKnown RBP12.95□□□□□ -0.34
CDH5-208ENST00000614547 CDC25CP30307 473 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 MYO1EQ12965 1108 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 PLS1Q14651 629 aa12.95□□□□□ -0.34
CDH5-208ENST00000614547 PAPD7Q5XG87 772 aaKnown RBP12.95□□□□□ -0.34
CDH5-208ENST00000614547 WDR19Q8NEZ3 1342 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms