RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 GMCL1Q96IK5 515 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 WNK4Q96J92 1243 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 MTMR9Q96QG7 549 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 SLC39A2Q9NP94 309 aa3.87□□□□□ -1.79
LIG4-205ENST00000614526 DLEC1Q9Y238 1755 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 POTEB3A0JP26 581 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 POTECB2RU33 542 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 PPP1R3GB7ZBB8 358 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 NFIBO00712 420 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 GTPBP6O43824 516 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 SKILP12757 684 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 CLK2P49760 499 aaKnown RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 PMS1P54277 932 aaKnown RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 HMGCS2P54868 508 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 PDE4DQ08499 809 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 GRB10Q13322 594 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 TNFAIP1Q13829 316 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 HS1BP3Q53T59 392 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 PPP4R3BQ5MIZ7 849 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 KRT79Q5XKE5 535 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 POTEBQ6S5H4 581 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 MOB2Q70IA6 237 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 LDHDQ86WU2 507 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 GLIS3Q8NEA6 775 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 NELFBQ8WX92 580 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 ZBED3Q96IU2 234 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 PNMA5Q96PV4 448 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 GSDMAQ96QA5 445 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 VPS16Q9H269 839 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 PGAP2Q9UHJ9 254 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 CCPG1Q9ULG6 757 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 KIAA1024Q9UPX6 916 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 POTEFA5A3E0 1075 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 MYMKA6NI61 221 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 USP27XA6NNY8 438 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 IKBKBO14920 756 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 ZBTB39O15060 712 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 ECM2O94769 699 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 POTEIP0CG38 1075 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 MYH8P13535 1937 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 ADKP55263 362 aaKnown RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 ZNF280AP59817 542 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 STK4Q13043 487 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 PLS1Q14651 629 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 NT5DC1Q5TFE4 455 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 POTEGQ6S5H5 508 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 POTEEQ6S8J3 1075 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 SARM1Q6SZW1 724 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 NSMFQ6X4W1 530 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 LRRC8AQ8IWT6 810 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 MTMR14Q8NCE2 650 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 CHURC1Q8WUH1 139 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 ZNF592Q92610 1267 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 HOOK2Q96ED9 719 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 MRFAP1L1Q96HT8 127 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 C16orf45Q96MC5 204 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 SH2D3AQ9BRG2 576 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 CCSER1Q9C0I3 900 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 BCAS3Q9H6U6 928 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 INTS13Q9NVM9 706 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 RGL1Q9NZL6 768 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 SYNRGQ9UMZ2 1314 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 CTDP1Q9Y5B0 961 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 MYH4Q9Y623 1939 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 SIPA1L1O43166 1804 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 ADM5C9JUS6 153 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 hCG_1984214I3L0E3 225 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 NKRFO15226 690 aaKnown RBP eCLIP3.86□□□□□ -1.79
LIG4-205ENST00000614526 PSMC6P62333 389 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 ARMCX5Q6P1M9 558 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 SV2BQ7L1I2 683 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 ZNF713Q8N859 430 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 IGSF22Q8N9C0 903 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 SPATA20Q8TB22 786 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 BPIFA3Q9BQP9 254 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 SYT17Q9BSW7 474 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 TRIM9Q9C026 710 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 VPS33BQ9H267 617 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 RPAP3Q9H6T3 665 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 BMP2KQ9NSY1 1161 aaPredicted RBP3.86□□□□□ -1.79
LIG4-205ENST00000614526 BLOC1S4Q9NUP1 217 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 TAB2Q9NYJ8 693 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 GPRC5DQ9NZD1 345 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 DACH1Q9UI36 760 aa3.86□□□□□ -1.79
LIG4-205ENST00000614526 QSER1Q2KHR3 1735 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 SFI1A8K8P3 1242 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 GCOM1H8Y6P7 765 aaPredicted RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 LAD1O00515 517 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 POLR2MP0CAP2 368 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 MYCLP12524 364 aaPredicted RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 YBX3P16989 372 aaKnown RBP eCLIP3.85□□□□□ -1.79
LIG4-205ENST00000614526 EIF2AK2P19525 551 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 LMNB1P20700 586 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 RPS12P25398 132 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 PRPHP41219 470 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 PAK1Q13153 545 aa3.85□□□□□ -1.79
LIG4-205ENST00000614526 PABPC4Q13310 644 aaKnown RBP eCLIP3.85□□□□□ -1.79
LIG4-205ENST00000614526 TTLL12Q14166 644 aaPredicted RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 CTTNQ14247 550 aaKnown RBP3.85□□□□□ -1.79
LIG4-205ENST00000614526 EAPPQ56P03 285 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms