RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 ESYT1Q9BSJ8 1104 aa26.41■■□□□ 1.82
FAM228B-208ENST00000613899 GPHNQ9NQX3 736 aaPredicted RBP26.41■■□□□ 1.82
FAM228B-208ENST00000613899 MTMR10Q9NXD2 777 aa26.41■■□□□ 1.82
FAM228B-208ENST00000613899 GRIN2DO15399 1336 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 CFBP00751 764 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 ANTXR2P58335 489 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 SMAD3P84022 425 aaKnown RBP26.4■■□□□ 1.82
FAM228B-208ENST00000613899 PURAQ00577 322 aaKnown RBP26.4■■□□□ 1.82
FAM228B-208ENST00000613899 GHRHRQ02643 423 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 STXBP2Q15833 593 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 BMP2KLQ5H9B9 411 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 HOMER1Q86YM7 354 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 TMEM199Q8N511 208 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 SAMD3Q8N6K7 520 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 MTA3Q9BTC8 594 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 PPP1R12CQ9BZL4 782 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 LSG1Q9H089 658 aaKnown RBP26.4■■□□□ 1.82
FAM228B-208ENST00000613899 RIOX1Q9H6W3 641 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 SENP2Q9HC62 589 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 MAP3K20Q9NYL2 800 aaKnown RBP26.4■■□□□ 1.82
FAM228B-208ENST00000613899 PCDHA1Q9Y5I3 950 aa26.4■■□□□ 1.82
FAM228B-208ENST00000613899 SCN10AQ9Y5Y9 1956 aa26.39■■□□□ 1.82
FAM228B-208ENST00000613899 PPP1R11O60927 126 aaPredicted RBP26.39■■□□□ 1.82
FAM228B-208ENST00000613899 MYL3P08590 195 aa26.39■■□□□ 1.82
FAM228B-208ENST00000613899 HSD17B4P51659 736 aa26.39■■□□□ 1.82
FAM228B-208ENST00000613899 PSMC6P62333 389 aa26.39■■□□□ 1.82
FAM228B-208ENST00000613899 ZNF697Q5TEC3 545 aa26.39■■□□□ 1.82
FAM228B-208ENST00000613899 ARHGEF16Q5VV41 709 aa26.39■■□□□ 1.82
FAM228B-208ENST00000613899 CASC1Q6TDU7 716 aa26.39■■□□□ 1.82
FAM228B-208ENST00000613899 MTG1Q9BT17 334 aaPredicted RBP26.39■■□□□ 1.82
FAM228B-208ENST00000613899 OPLAHO14841 1288 aa26.38■■□□□ 1.81
FAM228B-208ENST00000613899 KPNA6O60684 536 aa26.38■■□□□ 1.81
FAM228B-208ENST00000613899 IGDCC4Q8TDY8 1250 aa26.38■■□□□ 1.81
FAM228B-208ENST00000613899 HIPK3Q9H422 1215 aa26.38■■□□□ 1.81
FAM228B-208ENST00000613899 BAZ2BQ9UIF8 2168 aaKnown RBP26.38■■□□□ 1.81
FAM228B-208ENST00000613899 A6NJR5 290 aa26.37■■□□□ 1.81
FAM228B-208ENST00000613899 B4GALT4O60513 344 aa26.37■■□□□ 1.81
FAM228B-208ENST00000613899 ARIH2O95376 493 aa26.37■■□□□ 1.81
FAM228B-208ENST00000613899 EIF2AK2P19525 551 aaKnown RBP26.37■■□□□ 1.81
FAM228B-208ENST00000613899 COPS5Q92905 334 aa26.37■■□□□ 1.81
FAM228B-208ENST00000613899 PIGSQ96S52 555 aa26.37■■□□□ 1.81
FAM228B-208ENST00000613899 ALDH8A1Q9H2A2 487 aaPredicted RBP26.37■■□□□ 1.81
FAM228B-208ENST00000613899 ANO2Q9NQ90 1003 aa26.37■■□□□ 1.81
FAM228B-208ENST00000613899 PXMP2Q9NR77 195 aa26.37■■□□□ 1.81
FAM228B-208ENST00000613899 STXBP5LQ9Y2K9 1186 aa26.37■■□□□ 1.81
FAM228B-208ENST00000613899 DDAH1O94760 285 aa26.36■■□□□ 1.81
FAM228B-208ENST00000613899 CSF2RAP15509 400 aa26.36■■□□□ 1.81
FAM228B-208ENST00000613899 MCM5P33992 734 aa26.36■■□□□ 1.81
FAM228B-208ENST00000613899 SLC35G1Q2M3R5 365 aa26.36■■□□□ 1.81
FAM228B-208ENST00000613899 CCDC62Q6P9F0 684 aa26.36■■□□□ 1.81
FAM228B-208ENST00000613899 PSRC1Q6PGN9 363 aaPredicted RBP26.36■■□□□ 1.81
FAM228B-208ENST00000613899 SEPT14Q6ZU15 432 aa26.36■■□□□ 1.81
FAM228B-208ENST00000613899 MAP3K14Q99558 947 aa26.36■■□□□ 1.81
FAM228B-208ENST00000613899 LY9Q9HBG7 655 aa26.36■■□□□ 1.81
FAM228B-208ENST00000613899 PNMA6FA0A0J9YX94 578 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 SLC27A2O14975 620 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 PRC1O43663 620 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 CYTH3O43739 400 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 NR3C2P08235 984 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 SUPT20HL2P0C7V6 817 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 KIF5BP33176 963 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 ZNF654Q8IZM8 581 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 CTCFLQ8NI51 663 aaPredicted RBP26.35■■□□□ 1.81
FAM228B-208ENST00000613899 TMEM87BQ96K49 555 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.35■■□□□ 1.81
FAM228B-208ENST00000613899 TRPV6Q9H1D0 765 aa26.35■■□□□ 1.81
FAM228B-208ENST00000613899 EIF3JO75822 258 aaKnown RBP26.34■■□□□ 1.81
FAM228B-208ENST00000613899 GH1P01241 217 aa26.34■■□□□ 1.81
FAM228B-208ENST00000613899 CYP2C18P33260 490 aa26.34■■□□□ 1.81
FAM228B-208ENST00000613899 TMTC2Q8N394 836 aa26.34■■□□□ 1.81
FAM228B-208ENST00000613899 NOC4LQ9BVI4 516 aaKnown RBP26.34■■□□□ 1.81
FAM228B-208ENST00000613899 CREB3L3Q68CJ9 461 aa26.33■■□□□ 1.81
FAM228B-208ENST00000613899 PDCD2LQ9BRP1 358 aa26.33■■□□□ 1.81
FAM228B-208ENST00000613899 COL6A3P12111 3177 aa26.33■■□□□ 1.81
FAM228B-208ENST00000613899 GCOM1H8Y6P7 765 aaPredicted RBP26.32■■□□□ 1.8
FAM228B-208ENST00000613899 POLR2MP0CAP2 368 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 HOXA13P31271 388 aaPredicted RBP26.32■■□□□ 1.8
FAM228B-208ENST00000613899 NECTIN1Q15223 517 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 LY6KQ17RY6 165 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 TMEM240Q5SV17 173 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 NFRKBQ6P4R8 1299 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 NFXL1Q6ZNB6 911 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 FAM161BQ96MY7 647 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 SPZ1Q9BXG8 430 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 IL23AQ9NPF7 189 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 MRVI1Q9Y6F6 885 aa26.32■■□□□ 1.8
FAM228B-208ENST00000613899 TMEM265A0A087WTH1 108 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.31■■□□□ 1.8
FAM228B-208ENST00000613899 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.31■■□□□ 1.8
FAM228B-208ENST00000613899 CCDC69A6NI79 296 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 SH2B2O14492 632 aaPredicted RBP26.31■■□□□ 1.8
FAM228B-208ENST00000613899 MMP3P08254 477 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 PTPN11Q06124 597 aaPredicted RBP26.31■■□□□ 1.8
FAM228B-208ENST00000613899 ARHGAP1Q07960 439 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 NBPF20Q3BBV1 942 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 FAM47CQ5HY64 1035 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 RNF20Q5VTR2 975 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 AFG1LQ8WV93 481 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 MYL10Q9BUA6 226 aa26.31■■□□□ 1.8
FAM228B-208ENST00000613899 TRMT13Q9NUP7 481 aaKnown RBP26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms