RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 KIF2CQ99661 725 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 ELAC2Q9BQ52 826 aaKnown RBP7.47□□□□□ -1.21
CLCN3-211ENST00000613795 CUEDC2Q9H467 287 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 FAM207AQ9NSI2 230 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-211ENST00000613795 SH3BP5O60239 455 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 CD2BP2O95400 341 aaKnown RBP7.47□□□□□ -1.21
CLCN3-211ENST00000613795 TTC4O95801 387 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 ADCY8P40145 1251 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 MSH2P43246 934 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 USP14P54578 494 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 RAD23BP54727 409 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 CTSWP56202 376 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 MAP3K7CLP57077 242 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 TAF12Q16514 161 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 PALM2Q8IXS6 379 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 HELBQ8NG08 1087 aaPredicted RBP7.47□□□□□ -1.21
CLCN3-211ENST00000613795 GRAMD1AQ96CP6 724 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 THOC1Q96FV9 657 aaKnown RBP7.47□□□□□ -1.21
CLCN3-211ENST00000613795 ATP6V1G3Q96LB4 118 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 LRGUKQ96M69 825 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 ATG3Q9NT62 314 aa7.47□□□□□ -1.21
CLCN3-211ENST00000613795 BUB1O43683 1085 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 PCCAP05165 728 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-211ENST00000613795 NEK2P51955 445 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 MKRN3Q13064 507 aaKnown RBP7.46□□□□□ -1.21
CLCN3-211ENST00000613795 CALCRLQ16602 461 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 SLC44A4Q53GD3 710 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 DCAF15Q66K64 600 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 C3orf20Q8ND61 904 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.46□□□□□ -1.21
CLCN3-211ENST00000613795 ZNF653Q96CK0 615 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 ECT2Q9H8V3 914 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 TPCN1Q9ULQ1 816 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 NUB1Q9Y5A7 615 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.46□□□□□ -1.21
CLCN3-211ENST00000613795 ARHGAP31Q2M1Z3 1444 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 RPAP1Q9BWH6 1393 aaPredicted RBP7.46□□□□□ -1.21
CLCN3-211ENST00000613795 MED23Q9ULK4 1368 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 PREX2Q70Z35 1606 aa7.46□□□□□ -1.21
CLCN3-211ENST00000613795 CCDC188H7C350 402 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 M0QZ92 97 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 MCF2LO15068 1137 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 NOP14P78316 857 aaKnown RBP7.46□□□□□ -1.22
CLCN3-211ENST00000613795 CYLC2Q14093 348 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-211ENST00000613795 NCAPH2Q6IBW4 605 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 ZNF710Q8N1W2 664 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 CHMP6Q96FZ7 201 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 DYDC2Q96IM9 177 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 ANKRD27Q96NW4 1050 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 NCOA5Q9HCD5 579 aaKnown RBP7.46□□□□□ -1.22
CLCN3-211ENST00000613795 MAPK8IP1Q9UQF2 711 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 YEATS2Q9ULM3 1422 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 SOWAHDA6NJG2 315 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 ARHGEF9O43307 516 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 NDUFA10O95299 355 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 H2AFZP0C0S5 128 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 KRT3P12035 628 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 AP2B1P63010 937 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 LAMB3Q13751 1172 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 H2AFVQ71UI9 128 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 NIM1KQ8IY84 436 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 PDZD8Q8NEN9 1154 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 LSM14BQ9BX40 385 aaKnown RBP7.46□□□□□ -1.22
CLCN3-211ENST00000613795 ARMT1Q9H993 441 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 LRWD1Q9UFC0 647 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 MRPL11Q9Y3B7 192 aaKnown RBP7.46□□□□□ -1.22
CLCN3-211ENST00000613795 IVNS1ABPQ9Y6Y0 642 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 HECW2Q9P2P5 1572 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 B4E1Z4 1266 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 PEX14O75381 377 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 CRCPO75575 148 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 PPP1R37O75864 691 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 NAA30Q147X3 362 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-211ENST00000613795 AKNAD1Q5T1N1 836 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 GPHNQ9NQX3 736 aaPredicted RBP7.46□□□□□ -1.22
CLCN3-211ENST00000613795 ETAA1Q9NY74 926 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 PALD1Q9ULE6 856 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 ZMYM6O95789 1325 aa7.46□□□□□ -1.22
CLCN3-211ENST00000613795 NEURL1BA8MQ27 555 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ESRRBO95718 433 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 STAT1P42224 750 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 TMED10P49755 219 aaKnown RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 PIK3AP1Q6ZUJ8 805 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ZBTB38Q8NAP3 1195 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 HNRNPLLQ8WVV9 542 aaKnown RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 SUCLG2Q96I99 432 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ZMYND12Q9H0C1 365 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ATP8A1Q9Y2Q0 1164 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ARAP3Q8WWN8 1544 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 RIMBP2O15034 1052 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 KDM1AO60341 852 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 TRPA1O75762 1119 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ARL1P40616 181 aaPredicted RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 NCAPD2Q15021 1401 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ANKARQ7Z5J8 1434 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 SSH3Q8TE77 659 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 ZNF473Q8WTR7 871 aaKnown RBP7.45□□□□□ -1.22
CLCN3-211ENST00000613795 NSMCE1Q8WV22 266 aa7.45□□□□□ -1.22
CLCN3-211ENST00000613795 KIFC3Q9BVG8 833 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms