RNA–Protein interactions for RNA: ENST00000613421.4

GGA3-220, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 5,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-220ENST00000613421 TMED8Q6PL24 325 aaPredicted RBP15.12■□□□□ 0.01
GGA3-220ENST00000613421 PDE11AQ9HCR9 933 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 COL15A1P39059 1388 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 GAS8O95995 478 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 CD19P15391 556 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 PRDX5P30044 214 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 ODR4Q5SWX8 454 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 SPICE1Q8N0Z3 855 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 ALDH3A1P30838 453 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 EHHADHQ08426 723 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 PFKFB3Q16875 520 aaPredicted RBP15.12■□□□□ 0.01
GGA3-220ENST00000613421 CEP85LQ5SZL2 805 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 ARMCX5Q6P1M9 558 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 DEPTORQ8TB45 409 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 CSRNP1Q96S65 589 aa15.12■□□□□ 0.01
GGA3-220ENST00000613421 ADAMTS13Q76LX8 1427 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 GSG1L2A8MUP6 293 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 CACNB1Q02641 598 aaPredicted RBP15.11■□□□□ 0.01
GGA3-220ENST00000613421 PRKG1Q13976 671 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 SGMS1Q86VZ5 419 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 OXER1Q8TDS5 423 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 AS3MTQ9HBK9 375 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 FEZ2Q9UHY8 353 aaPredicted RBP15.11■□□□□ 0.01
GGA3-220ENST00000613421 CCPG1Q9ULG6 757 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 MFAP3LO75121 409 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 CCDC170Q8IYT3 715 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 SH3RF3Q8TEJ3 882 aaPredicted RBP15.11■□□□□ 0.01
GGA3-220ENST00000613421 CABS1Q96KC9 395 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 FAM204AQ9H8W3 233 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 TRPC5Q9UL62 973 aaPredicted RBP15.11■□□□□ 0.01
GGA3-220ENST00000613421 RPS6KA4O75676 772 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 MAP3K9P80192 1104 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 PPARDQ03181 441 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 MRRFQ96E11 262 aaKnown RBP15.11■□□□□ 0.01
GGA3-220ENST00000613421 FAM169AQ9Y6X4 670 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 NDUFA10O95299 355 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 GAP43P17677 238 aa15.11■□□□□ 0.01
GGA3-220ENST00000613421 DIP2AQ14689 1571 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 E7EVH7 732 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 HOXA7P31268 230 aaPredicted RBP15.1■□□□□ 0.01
GGA3-220ENST00000613421 ARHGAP25P42331 645 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 PSMD2Q13200 908 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 DHX36Q9H2U1 1008 aaKnown RBP15.1■□□□□ 0.01
GGA3-220ENST00000613421 DBNDD1Q9H9R9 158 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 RIPOR2Q9Y4F9 1068 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 C1orf167Q5SNV9 1468 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 PPFIA4O75335 1185 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 GDF11O95390 407 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 AFPP02771 609 aaKnown RBP15.1■□□□□ 0.01
GGA3-220ENST00000613421 CUL4BQ13620 913 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 SEPT2Q15019 361 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 PLA2G12BQ9BX93 195 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 AGLP35573 1532 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 KIF28PB7ZC32 967 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 GNGT1P63211 74 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 UBE2SQ16763 222 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 CCDC144BQ3MJ40 725 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 CCDC14Q49A88 953 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 OSBPL5Q9H0X9 879 aaPredicted RBP15.1■□□□□ 0.01
GGA3-220ENST00000613421 C1orf112Q9NSG2 853 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 PNMA2Q9UL42 364 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 GDAQ9Y2T3 454 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 KRT19P08727 400 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 LIG4P49917 911 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 PDE6CP51160 858 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 PPM1KQ8N3J5 372 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 GPR101Q96P66 508 aaPredicted RBP15.1■□□□□ 0.01
GGA3-220ENST00000613421 TRIM7Q9C029 511 aa15.1■□□□□ 0.01
GGA3-220ENST00000613421 NHEJ1Q9H9Q4 299 aaPredicted RBP15.1■□□□□ 0.01
GGA3-220ENST00000613421 DCP1AQ9NPI6 582 aaPredicted RBP15.1■□□□□ 0.01
GGA3-220ENST00000613421 CEMIPQ8WUJ3 1361 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 PNMA6FA0A0J9YX94 578 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 SLC8A3P57103 927 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 LACTBP83111 547 aaPredicted RBP15.09■□□□□ 0.01
GGA3-220ENST00000613421 SMCR8Q8TEV9 937 aaPredicted RBP15.09■□□□□ 0.01
GGA3-220ENST00000613421 BMP3P12645 472 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 MYL7Q01449 175 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 GUCY2DQ02846 1103 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 DHX40Q8IX18 779 aaKnown RBP15.09■□□□□ 0.01
GGA3-220ENST00000613421 CELF1Q92879 486 aaKnown RBP15.09■□□□□ 0.01
GGA3-220ENST00000613421 IL25Q9H293 177 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 NARFQ9UHQ1 456 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 H0YCG3 227 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 MB21D1Q8N884 522 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 VTI1AQ96AJ9 217 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 DPH5Q9H2P9 285 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
GGA3-220ENST00000613421 SNX16P57768 344 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 DMP1Q13316 513 aaPredicted RBP15.09■□□□□ 0.01
GGA3-220ENST00000613421 CC2D2BQ6DHV5 1058 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 PPM1EQ8WY54 764 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 ZNF577Q9BSK1 485 aa15.09■□□□□ 0.01
GGA3-220ENST00000613421 CCDC151A5D8V7 595 aa15.08■□□□□ 0.01
GGA3-220ENST00000613421 RGS16O15492 202 aaPredicted RBP15.08■□□□□ 0.01
GGA3-220ENST00000613421 ECM2O94769 699 aaPredicted RBP15.08■□□□□ 0.01
GGA3-220ENST00000613421 FYB2Q5VWT5 728 aa15.08■□□□□ 0.01
GGA3-220ENST00000613421 FAM186BQ8IYM0 893 aa15.08■□□□□ 0.01
GGA3-220ENST00000613421 HINFPQ9BQA5 517 aa15.08■□□□□ 0.01
GGA3-220ENST00000613421 PNPLA7Q6ZV29 1317 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms