RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 LPXNO60711 386 aa20.33■□□□□ 0.85
CSNK1E-215ENST00000612795 SLC30A10Q6XR72 485 aa20.33■□□□□ 0.85
CSNK1E-215ENST00000612795 DCAF4Q8WV16 495 aa20.33■□□□□ 0.85
CSNK1E-215ENST00000612795 SEC62Q99442 399 aaKnown RBP20.33■□□□□ 0.85
CSNK1E-215ENST00000612795 C11orf16Q9NQ32 467 aa20.33■□□□□ 0.85
CSNK1E-215ENST00000612795 KIAA1217Q5T5P2 1943 aa20.33■□□□□ 0.84
CSNK1E-215ENST00000612795 LCHNA4D1U4 455 aa20.32■□□□□ 0.84
CSNK1E-215ENST00000612795 NMT2O60551 498 aa20.32■□□□□ 0.84
CSNK1E-215ENST00000612795 SCFD2Q8WU76 684 aa20.32■□□□□ 0.84
CSNK1E-215ENST00000612795 RANBP6O60518 1105 aaKnown RBP20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 SLC16A2P36021 539 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 WDR5P61964 334 aaKnown RBP20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 PTGISQ16647 500 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 SYDE2Q5VT97 1194 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 RNF207Q6ZRF8 634 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 CAGE1Q8TC20 777 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 AFAP1L1Q8TED9 768 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 COPS5Q92905 334 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 IL17RBQ9NRM6 502 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 LMCD1Q9NZU5 365 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 MTUS1Q9ULD2 1270 aa20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.31■□□□□ 0.84
CSNK1E-215ENST00000612795 MYH6P13533 1939 aa20.3■□□□□ 0.84
CSNK1E-215ENST00000612795 A6NJR5 290 aa20.3■□□□□ 0.84
CSNK1E-215ENST00000612795 TXNP10599 105 aaKnown RBP20.3■□□□□ 0.84
CSNK1E-215ENST00000612795 CTDSPL2Q05D32 466 aa20.3■□□□□ 0.84
CSNK1E-215ENST00000612795 TTBK2Q6IQ55 1244 aa20.3■□□□□ 0.84
CSNK1E-215ENST00000612795 TMCO2Q7Z6W1 182 aaPredicted RBP20.3■□□□□ 0.84
CSNK1E-215ENST00000612795 FSD1Q9BTV5 496 aa20.3■□□□□ 0.84
CSNK1E-215ENST00000612795 PI4K2BG5E9Z4 385 aa20.29■□□□□ 0.84
CSNK1E-215ENST00000612795 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
CSNK1E-215ENST00000612795 UBE2ZQ9H832 354 aaPredicted RBP20.29■□□□□ 0.84
CSNK1E-215ENST00000612795 MYH7BA7E2Y1 1941 aa20.29■□□□□ 0.84
CSNK1E-215ENST00000612795 FRMPD2Q68DX3 1309 aaPredicted RBP20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 MICAL3Q7RTP6 2002 aa20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 B4DLN1 442 aa20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 MRPL12P52815 198 aaKnown RBP20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 DEFB103AP81534 67 aa20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 CNKSR3Q6P9H4 555 aa20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 LRRC8DQ7L1W4 858 aa20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 GPCPD1Q9NPB8 672 aa20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 CD320Q9NPF0 282 aa20.28■□□□□ 0.84
CSNK1E-215ENST00000612795 SELPP16109 830 aa20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 SSTR3P32745 418 aaPredicted RBP20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 RPS6P62753 249 aaKnown RBP20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 ZMYM1Q5SVZ6 1142 aa20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 BTNL9Q6UXG8 535 aa20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 DNERQ8NFT8 737 aa20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 TGS1Q96RS0 853 aaKnown RBP20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 INCENPQ9NQS7 918 aa20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 TOMM22Q9NS69 142 aa20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 PNMA2Q9UL42 364 aa20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 PIEZO1Q92508 2521 aa20.27■□□□□ 0.84
CSNK1E-215ENST00000612795 NLRC5Q86WI3 1866 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 PRR33A8MZF0 331 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 GJB5O95377 273 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 PARNO95453 639 aaKnown RBP20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 KCNA5P22460 613 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 EDNRBP24530 442 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 GDF6Q6KF10 455 aaPredicted RBP20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 ALYREFQ86V81 257 aaKnown RBP20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 GJD3Q8N144 294 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 CLEC4DQ8WXI8 215 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 RAD9AQ99638 391 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 SUGCTQ9HAC7 445 aa20.26■□□□□ 0.83
CSNK1E-215ENST00000612795 MMP3P08254 477 aa20.25■□□□□ 0.83
CSNK1E-215ENST00000612795 TOP1P11387 765 aaKnown RBP20.25■□□□□ 0.83
CSNK1E-215ENST00000612795 FAM178BQ8IXR5 827 aa20.25■□□□□ 0.83
CSNK1E-215ENST00000612795 AFG1LQ8WV93 481 aa20.25■□□□□ 0.83
CSNK1E-215ENST00000612795 TTC41PQ6P2S7 1318 aa20.25■□□□□ 0.83
CSNK1E-215ENST00000612795 ABHD14A-ACY1A0A1B0GW23 586 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 LINC01553A4QN01 128 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 ARIH2O95376 493 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 NOVP48745 357 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 ERVK-21P61565 698 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 CSPP1Q1MSJ5 1256 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 LEXMQ3ZCV2 418 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 FAM117BQ6P1L5 589 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 SESTD1Q86VW0 696 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 UIMC1Q96RL1 719 aa20.24■□□□□ 0.83
CSNK1E-215ENST00000612795 ORC4O43929 436 aa20.23■□□□□ 0.83
CSNK1E-215ENST00000612795 EFCAB14O75071 495 aa20.23■□□□□ 0.83
CSNK1E-215ENST00000612795 GH1P01241 217 aa20.23■□□□□ 0.83
CSNK1E-215ENST00000612795 RRP12Q5JTH9 1297 aaKnown RBP20.23■□□□□ 0.83
CSNK1E-215ENST00000612795 CHST3Q7LGC8 479 aa20.23■□□□□ 0.83
CSNK1E-215ENST00000612795 CTAGE1Q96RT6 745 aa20.23■□□□□ 0.83
CSNK1E-215ENST00000612795 TMEM47Q9BQJ4 181 aa20.23■□□□□ 0.83
CSNK1E-215ENST00000612795 WDR19Q8NEZ3 1342 aa20.23■□□□□ 0.83
CSNK1E-215ENST00000612795 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 NBNO60934 754 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 CXCL10P02778 98 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 CKBP12277 381 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 ALADP13716 330 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 IL9P15248 144 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 CASTP20810 708 aaKnown RBP20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 RBL2Q08999 1139 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 IKBKEQ14164 716 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 GPNMBQ14956 572 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 USH1GQ495M9 461 aa20.22■□□□□ 0.83
CSNK1E-215ENST00000612795 PTCRAQ6ISU1 281 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms