RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 UBA7P41226 1012 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 JAKMIP3Q5VZ66 844 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 GIMAP8Q8ND71 665 aaPredicted RBP16.46■□□□□ 0.23
CDH1-213ENST00000612417 THAP9Q9H5L6 903 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 SPON1Q9HCB6 807 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 CDC23Q9UJX2 597 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 GJA3Q9Y6H8 435 aa16.46■□□□□ 0.23
CDH1-213ENST00000612417 LGALS16A8MUM7 142 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 GDF11O95390 407 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 PDHBP11177 359 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 PLA2G4AP47712 749 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 TUBB4BP68371 445 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 STIM1Q13586 685 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 SHROOM1Q2M3G4 852 aaPredicted RBP16.46■□□□□ 0.22
CDH1-213ENST00000612417 RBM26Q5T8P6 1007 aaKnown RBP16.46■□□□□ 0.22
CDH1-213ENST00000612417 CC2D1AQ6P1N0 951 aaPredicted RBP16.46■□□□□ 0.22
CDH1-213ENST00000612417 TATDN1Q6P1N9 297 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 KRT25Q7Z3Z0 450 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 SRGAP1Q7Z6B7 1085 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 NUP88Q99567 741 aaPredicted RBP16.46■□□□□ 0.22
CDH1-213ENST00000612417 MYOZ2Q9NPC6 264 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 ATRNL1Q5VV63 1379 aa16.46■□□□□ 0.22
CDH1-213ENST00000612417 A0A0U1RQJ8 604 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 SHTN1A0MZ66 631 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 RNF225M0QZC1 329 aaPredicted RBP16.45■□□□□ 0.22
CDH1-213ENST00000612417 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 TEX35Q5T0J7 233 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 CEP112Q8N8E3 955 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 MTMR14Q8NCE2 650 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 NOC3LQ8WTT2 800 aaKnown RBP16.45■□□□□ 0.22
CDH1-213ENST00000612417 FAM151AQ8WW52 585 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 ATRIPQ8WXE1 791 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 RRP36Q96EU6 259 aaKnown RBP16.45■□□□□ 0.22
CDH1-213ENST00000612417 UBA5Q9GZZ9 404 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.45■□□□□ 0.22
CDH1-213ENST00000612417 GPCPD1Q9NPB8 672 aa16.45■□□□□ 0.22
CDH1-213ENST00000612417 SEC63Q9UGP8 760 aaKnown RBP16.45■□□□□ 0.22
CDH1-213ENST00000612417 ZHX1Q9UKY1 873 aaPredicted RBP16.45■□□□□ 0.22
CDH1-213ENST00000612417 LTBP3Q9NS15 1303 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 PP2D1A8MPX8 630 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 PSMA7O14818 248 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 UBXN1Q04323 297 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 ORC2Q13416 577 aaPredicted RBP16.44■□□□□ 0.22
CDH1-213ENST00000612417 SEPT2Q15019 361 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 NBPF9Q3BBW0 867 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 ASPRV1Q53RT3 343 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 ZNF507Q8TCN5 953 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 KANSL2Q9H9L4 492 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 GREB1LQ9C091 1923 aaPredicted RBP16.44■□□□□ 0.22
CDH1-213ENST00000612417 ARFGEF1Q9Y6D6 1849 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 CTAGE9A4FU28 777 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 KRT9P35527 623 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 ARHGAP25P42331 645 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 CHMP4BP1P59074 171 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 CCDC96Q2M329 555 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 ZNF569Q5MCW4 686 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 TTI2Q6NXR4 508 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 TMEM179Q6ZVK1 233 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 MB21D1Q8N884 522 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 ACRBPQ8NEB7 543 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 DHTKD1Q96HY7 919 aaPredicted RBP16.44■□□□□ 0.22
CDH1-213ENST00000612417 DNAJC7Q99615 494 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 PARD6BQ9BYG5 372 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 MAPK8IP1Q9UQF2 711 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 UTRNP46939 3433 aa16.44■□□□□ 0.22
CDH1-213ENST00000612417 CCDC151A5D8V7 595 aa16.43■□□□□ 0.22
CDH1-213ENST00000612417 TRIM49BA6NDI0 452 aa16.43■□□□□ 0.22
CDH1-213ENST00000612417 WNT10BO00744 389 aa16.43■□□□□ 0.22
CDH1-213ENST00000612417 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
CDH1-213ENST00000612417 OR52Z1P0C646 297 aa16.43■□□□□ 0.22
CDH1-213ENST00000612417 EEF2P13639 858 aaKnown RBP16.43■□□□□ 0.22
CDH1-213ENST00000612417 BRD2P25440 801 aaKnown RBP16.43■□□□□ 0.22
CDH1-213ENST00000612417 PMS1P54277 932 aaKnown RBP16.43■□□□□ 0.22
CDH1-213ENST00000612417 PAXIP1Q6ZW49 1069 aaPredicted RBP16.43■□□□□ 0.22
CDH1-213ENST00000612417 RASSF8Q8NHQ8 419 aa16.43■□□□□ 0.22
CDH1-213ENST00000612417 LRRC15Q8TF66 581 aa16.43■□□□□ 0.22
CDH1-213ENST00000612417 HERC5Q9UII4 1024 aaKnown RBP16.43■□□□□ 0.22
CDH1-213ENST00000612417 COL2A1P02458 1487 aaPredicted RBP16.43■□□□□ 0.22
CDH1-213ENST00000612417 RPS12P25398 132 aaKnown RBP16.42■□□□□ 0.22
CDH1-213ENST00000612417 GNA11P29992 359 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 PPP1R2P41236 205 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 GMPSP49915 693 aaPredicted RBP16.42■□□□□ 0.22
CDH1-213ENST00000612417 NAPAP54920 295 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 ICA1Q05084 483 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 NONOQ15233 471 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDH1-213ENST00000612417 ARHGAP27Q6ZUM4 889 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 ZNF771Q7L3S4 317 aaPredicted RBP16.42■□□□□ 0.22
CDH1-213ENST00000612417 TMEM39BQ9GZU3 492 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 ARFGAP3Q9NP61 516 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 ST7Q9NRC1 585 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 CNTNAP1P78357 1384 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 ESYT2A0FGR8 921 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 GH2P01242 217 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 PRELPP51888 382 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 BRD3Q15059 726 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 COBLL1Q53SF7 1204 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 FKBP1CQ5VVH2 108 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 SLC35F6Q8N357 371 aa16.42■□□□□ 0.22
CDH1-213ENST00000612417 OR8K1Q8NGG5 319 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms