RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 KANK3Q6NY19 840 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 STAG2Q8N3U4 1231 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 SNRNP27Q8WVK2 155 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 SRRTQ9BXP5 876 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 MYH13Q9UKX3 1938 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 FAM205AQ6ZU69 1335 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 N4BP1O75113 896 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 GOLGA8HP0CJ92 632 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 KCNA3P22001 575 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 KRT9P35527 623 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 UBXN1Q04323 297 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 LONRF2Q1L5Z9 754 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 FCHSD1Q86WN1 690 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 RBM12BQ8IXT5 1001 aaKnown RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 C17orf50Q8WW18 174 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 NELFBQ8WX92 580 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 PPM1EQ8WY54 764 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 GPR101Q96P66 508 aaPredicted RBP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 CRACR2AQ9BSW2 395 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 IRF2BPLQ9H1B7 796 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 ARHGEF10LQ9HCE6 1279 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 LMCD1Q9NZU5 365 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 HDAC6Q9UBN7 1215 aa11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.92□□□□□ -0.5
PCDHGC3-202ENST00000611950 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 H3BQF6 201 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 ERCC5P28715 1186 aaPredicted RBP11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 CHRNA5P30532 468 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 PMS1P54277 932 aaKnown RBP11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 PPP2R5BQ15173 497 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 TMTC3Q6ZXV5 915 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 ARL10Q8N8L6 244 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 SLC44A5Q8NCS7 719 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 SPATA20Q8TB22 786 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 TNFRSF25Q93038 417 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 CAPZA3Q96KX2 299 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 UIMC1Q96RL1 719 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 CNTNAP5Q8WYK1 1306 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 SRGAP2O75044 1071 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 ZMYND10O75800 440 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 NAT2P11245 290 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 TXNRD3Q86VQ6 643 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 TEX11Q8IYF3 940 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 GPR161Q8N6U8 529 aaKnown RBP11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 TRIML1Q8N9V2 468 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 RBM46Q8TBY0 533 aaKnown RBP11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 PLEKHG4BQ96PX9 1271 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 DCP1AQ9NPI6 582 aaPredicted RBP11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 MCM9Q9NXL9 1143 aa11.91□□□□□ -0.5
PCDHGC3-202ENST00000611950 MYO1BO43795 1136 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 CPP00450 1065 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 PRCPP42785 496 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 LMAN1P49257 510 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 PDIA5Q14554 519 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 TSNAXIP1Q2TAA8 658 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 SLC10A5Q5PT55 438 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 RSRC2Q7L4I2 434 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 HPS3Q969F9 1004 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 PDE11AQ9HCR9 933 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 USP17L3A6NCW0 530 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 USP17L4A6NCW7 530 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 GOLGA6L9A6NEM1 432 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 KCNJ18B7U540 433 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 NKRFO15226 690 aaKnown RBP eCLIP11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 STAT6P42226 847 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 KLK7P49862 253 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 CCNHP51946 323 aaPredicted RBP11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 RPS8P62241 208 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 MRPS25P82663 173 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 ICA1Q05084 483 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 PAK1Q13153 545 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 KCNJ12Q14500 433 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 RBBP5Q15291 538 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 CDKAL1Q5VV42 579 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 LEKR1Q6ZMV7 388 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 USP17L1Q7RTZ2 530 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 IQCF2Q8IXL9 164 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 NOA1Q8NC60 698 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 FUT8Q9BYC5 575 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 RRAGCQ9HB90 399 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 SPATS2LQ9NUQ6 558 aaKnown RBP11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 STX8Q9UNK0 236 aa11.9□□□□□ -0.5
PCDHGC3-202ENST00000611950 DLEC1Q9Y238 1755 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 SNUPNO95149 360 aaKnown RBP11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 SCG2P13521 617 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 TXLNAP40222 546 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 COPB1P53618 953 aaKnown RBP11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 DDR1Q08345 913 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 INF2Q27J81 1249 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 IQUBQ8NA54 791 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 ANKZF1Q9H8Y5 726 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 ABHD10Q9NUJ1 306 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 SBF1O95248 1867 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 CTAGE9A4FU28 777 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 DDAH1O94760 285 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 FLT3P36888 993 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 HEATR3Q7Z4Q2 680 aa11.89□□□□□ -0.51
PCDHGC3-202ENST00000611950 SH3RF1Q7Z6J0 888 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms