RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 INF2Q27J81 1249 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 SLC30A10Q6XR72 485 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 FCHSD1Q86WN1 690 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 ANKRD35Q8N283 1001 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 TBCKQ8TEA7 893 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 EHMT1Q9H9B1 1298 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 CFAP45Q9UL16 551 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 RPTORQ8N122 1335 aa18.21■□□□□ 0.51
CLTCL1-207ENST00000611723 DNAJC25-GNG10A0A024R161 153 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 BAG4O95429 457 aaKnown RBP18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 FCER1AP12319 257 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 KCTD2Q14681 263 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 NEK8Q86SG6 692 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 FAM133AQ8N9E0 248 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 PGBD1Q96JS3 809 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 TAAR1Q96RJ0 339 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 MMP19Q99542 508 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 RTEL1Q9NZ71 1219 aa18.2■□□□□ 0.5
CLTCL1-207ENST00000611723 CYP3A7-CYP3A51PA0A087WV96 503 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 PTPREP23469 700 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 CYP3A7P24462 503 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 CIITAP33076 1130 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 NASPP49321 788 aaPredicted RBP18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 KRT85P78386 507 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 ORC2Q13416 577 aaPredicted RBP18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 MOXD1Q6UVY6 613 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 PLEKHH3Q7Z736 793 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 CCAR1Q8IX12 1150 aaKnown RBP18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 DNERQ8NFT8 737 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 ZNF296Q8WUU4 475 aaPredicted RBP18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 USP28Q96RU2 1077 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 NAP1L4Q99733 375 aaKnown RBP18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 POLR3EQ9NVU0 708 aa18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 MORC2Q9Y6X9 1032 aaPredicted RBP18.19■□□□□ 0.5
CLTCL1-207ENST00000611723 RBBP6Q7Z6E9 1792 aaKnown RBP18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 POTEB2H3BUK9 544 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 ARHGAP4P98171 946 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 GRB14Q14449 540 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 FOXD4L6Q3SYB3 417 aaPredicted RBP18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 TTC38Q5R3I4 469 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 ANO1Q5XXA6 986 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 PPP4R3AQ6IN85 833 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 XRRA1Q6P2D8 792 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 FOXD4L3Q6VB84 417 aaPredicted RBP18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 GPR142Q7Z601 462 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 NSUN6Q8TEA1 469 aaKnown RBP18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 MBOAT7Q96N66 472 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 RMDN3Q96TC7 470 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 PXMP2Q9NR77 195 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 TFIP11Q9UBB9 837 aaKnown RBP18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 RCOR1Q9UKL0 485 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 PCDHB6Q9Y5E3 794 aa18.18■□□□□ 0.5
CLTCL1-207ENST00000611723 TCHHQ07283 1943 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 SLC15A5A6NIM6 579 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 WNT7AO00755 349 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 BMP15O95972 392 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 GCFC2P16383 781 aaKnown RBP18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 CHAMP1Q96JM3 812 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 GBP4Q96PP9 640 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 IWS1Q96ST2 819 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 PDCD2LQ9BRP1 358 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 SCAND2PQ9GZW5 306 aaPredicted RBP18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 MYH7BA7E2Y1 1941 aa18.17■□□□□ 0.5
CLTCL1-207ENST00000611723 MYH15Q9Y2K3 1946 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 YEATS4O95619 227 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 CNTN2Q02246 1040 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 PGM5Q15124 567 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 PTPAQ15257 358 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 SF3A1Q15459 793 aaKnown RBP18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 ZNF174Q15697 407 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 LETM2Q2VYF4 491 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 MORN1Q5T089 497 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 WDR78Q5VTH9 848 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 ARHGEF16Q5VV41 709 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 PCNX4Q63HM2 1172 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 VSIG10LQ86VR7 867 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 LINC00301Q8NCQ3 95 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 PURBQ96QR8 312 aaKnown RBP18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 ADD3Q9UEY8 706 aaKnown RBP18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 CEP131Q9UPN4 1083 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 DIS3Q9Y2L1 958 aaKnown RBP18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 IVNS1ABPQ9Y6Y0 642 aa18.16■□□□□ 0.5
CLTCL1-207ENST00000611723 SOWAHBA6NEL2 793 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 ATP2B1P20020 1258 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 ADORA2AP29274 412 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 NBR1Q14596 966 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 SLC39A14Q15043 492 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 ZNF792Q3KQV3 632 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 Q4G0T1 1027 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 C4orf32Q8N8J7 132 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 FGD4Q96M96 766 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 FTOQ9C0B1 505 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 CNPY2Q9Y2B0 182 aa18.15■□□□□ 0.5
CLTCL1-207ENST00000611723 B4DLN1 442 aa18.14■□□□□ 0.49
CLTCL1-207ENST00000611723 CCNT1O60563 726 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms