RNA–Protein interactions for RNA: ENST00000611646.4

RNF38-210, Transcript of ring finger protein 38, humanhuman

TSL 5 BASIC

Gene RNF38, Length 5,185 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-210ENST00000611646 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 TTC26A0AVF1 554 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 CCDC160A6NGH7 325 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 ACTN4O43707 911 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 RPSAP08865 295 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 TNNI1P19237 187 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 IL6STP40189 918 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 PDCLQ13371 301 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 E2F5Q15329 346 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 ZKSCAN8Q15776 578 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 EXOC3L4Q17RC7 722 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 WDR44Q5JSH3 913 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 POTEDQ86YR6 584 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 PIGOQ8TEQ8 1089 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 NKIRAS1Q9NYS0 192 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 TBK1Q9UHD2 729 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 CEP170BQ9Y4F5 1589 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 NPHP3-ACAD11A0A0J9YXS1 232 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 LRRC53A6NM62 1247 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L15C9J2P7 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L13C9JLJ4 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L11C9JVI0 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L18D6R9N7 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L22D6RA61 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L17D6RBQ6 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L19D6RCP7 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L20D6RJB6 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 RGS16O15492 202 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 N4BP1O75113 896 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 CLTAP09496 248 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 ALAS1P13196 640 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 CALRP27797 417 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 STAT3P40763 770 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 PLTPP55058 493 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 ICA1Q05084 483 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L24Q0WX57 530 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 NNTQ13423 1086 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 CTTNQ14247 550 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 TXNRD1Q16881 649 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 KCTD19Q17RG1 926 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 CERKLQ49MI3 558 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 BSPRYQ5W0U4 402 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 TRIM68Q6AZZ1 485 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 USP17L6PQ6QN14 398 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 TMTC3Q6ZXV5 915 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 INTS8Q75QN2 995 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 LRRC45Q96CN5 670 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 PPP1R12CQ9BZL4 782 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 OSBPL5Q9H0X9 879 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 NDST4Q9H3R1 872 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 VPS37BQ9H9H4 285 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNF38-210ENST00000611646 CD2APQ9Y5K6 639 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 CDC42BPGQ6DT37 1551 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 EIF4E1BA6NMX2 242 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 E9PMD0 336 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 TFRCP02786 760 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 ATF7P17544 494 aaPredicted RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 KRT15P19012 456 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 CLNS1AP54105 237 aaKnown RBP4.17□□□□□ -1.74
RNF38-210ENST00000611646 SESN3P58005 492 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 VSNL1P62760 191 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 RASA3Q14644 834 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 SLFN13Q68D06 897 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 FAM196AQ6ZSG2 479 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 MIGA2Q7L4E1 593 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 FAM178BQ8IXR5 827 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 STAG1Q8WVM7 1258 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 PANX2Q96RD6 677 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNF38-210ENST00000611646 ADGRG1Q9Y653 693 aa4.17□□□□□ -1.74
RNF38-210ENST00000611646 GOLGA8IPA6NC78 632 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 GOLGA8JA6NMD2 632 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 PALMO75781 387 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 CD19P15391 556 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 SSTR3P32745 418 aaPredicted RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 PPP1R2P41236 205 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 FXR1P51114 621 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNF38-210ENST00000611646 FAM133BQ5BKY9 247 aaKnown RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 ODR4Q5SWX8 454 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 USP37Q86T82 979 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 SRBD1Q8N5C6 995 aaKnown RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.16□□□□□ -1.74
RNF38-210ENST00000611646 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 TEKT1Q969V4 418 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 MS4A14Q96JA4 679 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 LZTS2Q9BRK4 669 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 NT5C3AQ9H0P0 336 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 STMN4Q9H169 189 aaPredicted RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 EPB41L4AQ9HCS5 686 aaPredicted RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 ATP8A2Q9NTI2 1148 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 FBXO2Q9UK22 296 aaPredicted RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 CEP83Q9Y592 693 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 ZNF335Q9H4Z2 1342 aaPredicted RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 CCDC151A5D8V7 595 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 ATP2A1O14983 1001 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 TRIM66O15016 1216 aa4.16□□□□□ -1.74
RNF38-210ENST00000611646 TCP1P17987 556 aaKnown RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 EEF1GP26641 437 aaKnown RBP4.16□□□□□ -1.74
RNF38-210ENST00000611646 PDE6BP35913 854 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms