RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 EPN1Q9Y6I3 576 aaPredicted RBP11.67□□□□□ -0.54
PABPC1-224ENST00000610907 TTC26A0AVF1 554 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 CTAGE9A4FU28 777 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
PABPC1-224ENST00000610907 SLC37A4O43826 429 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 TDP2O95551 362 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 SCNN1DP51172 638 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 KRT83P78385 493 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 ZBED6P86452 979 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 CDK17Q00537 523 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 LRRC63Q05C16 580 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 TBC1D8BQ0IIM8 1120 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 MEA1Q16626 185 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 CCDC96Q2M329 555 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 FKBP15Q5T1M5 1219 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 KRT222Q8N1A0 295 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 GOLGA1Q92805 767 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 CNOT6LQ96LI5 555 aaKnown RBP11.66□□□□□ -0.54
PABPC1-224ENST00000610907 ARID3AQ99856 593 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 HAUS4Q9H6D7 363 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 ZNHIT6Q9NWK9 470 aaKnown RBP11.66□□□□□ -0.54
PABPC1-224ENST00000610907 DDX25Q9UHL0 483 aaKnown RBP11.66□□□□□ -0.54
PABPC1-224ENST00000610907 CDC23Q9UJX2 597 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 SERPINA10Q9UK55 444 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 SYNPO2Q9UMS6 1093 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
PABPC1-224ENST00000610907 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
PABPC1-224ENST00000610907 KDM3AQ9Y4C1 1321 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 CYP3A7-CYP3A51PA0A087WV96 503 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 MYMKA6NI61 221 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 SPDYE4A6NLX3 237 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 POTEB2H3BUK9 544 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 RNF225M0QZC1 329 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-224ENST00000610907 PPP1R11O60927 126 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-224ENST00000610907 NDUFA10O95299 355 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 MMP10P09238 476 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 PRKCSHP14314 528 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-224ENST00000610907 CYP3A7P24462 503 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 MTIF2P46199 727 aaKnown RBP11.65□□□□□ -0.54
PABPC1-224ENST00000610907 TNNI2P48788 182 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 EIF6P56537 245 aaKnown RBP11.65□□□□□ -0.54
PABPC1-224ENST00000610907 AP3B2Q13367 1082 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 CERKLQ49MI3 558 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-224ENST00000610907 ZNF569Q5MCW4 686 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 TATDN1Q6P1N9 297 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 TMCO3Q6UWJ1 677 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 ARHGAP27Q6ZUM4 889 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 SRGAP1Q7Z6B7 1085 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 LRRN4CLQ8ND94 238 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 SNX29Q8TEQ0 813 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 NOC4LQ9BVI4 516 aaKnown RBP11.65□□□□□ -0.54
PABPC1-224ENST00000610907 TTYH3Q9C0H2 523 aa11.65□□□□□ -0.54
PABPC1-224ENST00000610907 BMP2KQ9NSY1 1161 aaPredicted RBP11.65□□□□□ -0.54
PABPC1-224ENST00000610907 USP17L10C9JJH3 530 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 H0YIN7 160 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 MARCH6O60337 910 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 FCER1AP12319 257 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 CYLC1P35663 651 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-224ENST00000610907 FAM193AP78312 1265 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 GABPB1Q06547 395 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-224ENST00000610907 EHHADHQ08426 723 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 NFIAQ12857 509 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 MCM6Q14566 821 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 DACT2Q5SW24 774 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 UTP14CQ5TAP6 766 aaKnown RBP11.64□□□□□ -0.55
PABPC1-224ENST00000610907 CC2D2BQ6DHV5 1058 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 TTBK2Q6IQ55 1244 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 TMEM179Q6ZVK1 233 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 CCDC84Q86UT8 332 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-224ENST00000610907 KIAA0895Q8NCT3 520 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 EHBP1Q8NDI1 1231 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 HAS1Q92839 578 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 MBOAT7Q96N66 472 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 NAPGQ99747 312 aaPredicted RBP11.64□□□□□ -0.55
PABPC1-224ENST00000610907 MXD3Q9BW11 206 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 TRIM34Q9BYJ4 488 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 PCDHA12Q9UN75 941 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 MYH4Q9Y623 1939 aa11.64□□□□□ -0.55
PABPC1-224ENST00000610907 B4DLN1 442 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 PES1O00541 588 aaKnown RBP11.63□□□□□ -0.55
PABPC1-224ENST00000610907 ENTPD3O75355 529 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 KIF20AO95235 890 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 FOSP01100 380 aaPredicted RBP11.63□□□□□ -0.55
PABPC1-224ENST00000610907 TUBBP07437 444 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 TRIM21P19474 475 aaKnown RBP11.63□□□□□ -0.55
PABPC1-224ENST00000610907 ARHGAP25P42331 645 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 SLC1A4P43007 532 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 CLCN6P51797 869 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 ATP2B2Q01814 1243 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 TRAF1Q13077 416 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 WHAMMP3Q1A5X7 153 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 KIF4BQ2VIQ3 1234 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 MIIPQ5JXC2 388 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 SLFN13Q68D06 897 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 SLFN12Q8IYM2 578 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 GMCL1P1Q8NEA9 526 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 ACRBPQ8NEB7 543 aa11.63□□□□□ -0.55
PABPC1-224ENST00000610907 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.55
PABPC1-224ENST00000610907 GMCL1Q96IK5 515 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms