RNA–Protein interactions for RNA: ENST00000610485.1

SNX20-205, Transcript of sorting nexin 20, humanhuman

TSL 5 BASIC

Gene SNX20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-205ENST00000610485 ZNF654Q8IZM8 581 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 SAMD3Q8N6K7 520 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 VTI1AQ96AJ9 217 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 TMEM87BQ96K49 555 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 PIGSQ96S52 555 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 IWS1Q96ST2 819 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 RMDN3Q96TC7 470 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 SEZ6LQ9BYH1 1024 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 GPHNQ9NQX3 736 aaPredicted RBP14.97□□□□□ -0.01
SNX20-205ENST00000610485 MAP3K20Q9NYL2 800 aaKnown RBP14.97□□□□□ -0.01
SNX20-205ENST00000610485 PCDHA1Q9Y5I3 950 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 SZT2Q5T011 3432 aa14.97□□□□□ -0.01
SNX20-205ENST00000610485 GRIN2DO15399 1336 aa14.96□□□□□ -0.01
SNX20-205ENST00000610485 CDC45O75419 566 aa14.96□□□□□ -0.01
SNX20-205ENST00000610485 CFBP00751 764 aa14.96□□□□□ -0.01
SNX20-205ENST00000610485 CPT1AP50416 773 aa14.96□□□□□ -0.01
SNX20-205ENST00000610485 TRAF1Q13077 416 aa14.96□□□□□ -0.01
SNX20-205ENST00000610485 OR6J1Q8NGC5 347 aa14.96□□□□□ -0.01
SNX20-205ENST00000610485 CCDC136Q96JN2 1154 aa14.96□□□□□ -0.01
SNX20-205ENST00000610485 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 TLR3O15455 904 aaKnown RBP14.95□□□□□ -0.02
SNX20-205ENST00000610485 ARIH2O95376 493 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 TIMP1P01033 207 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 CD4P01730 458 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 LIFRP42702 1097 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 ITGA7Q13683 1181 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 TTLL4Q14679 1199 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 SHHQ15465 462 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 STXBP2Q15833 593 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 C9orf50Q5SZB4 431 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 ARHGEF16Q5VV41 709 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 CCDC62Q6P9F0 684 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 TMTC2Q8N394 836 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
SNX20-205ENST00000610485 MYL10Q9BUA6 226 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 SPZ1Q9BXG8 430 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 PXMP2Q9NR77 195 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 POLR3EQ9NVU0 708 aa14.95□□□□□ -0.02
SNX20-205ENST00000610485 A6NJR5 290 aa14.94□□□□□ -0.02
SNX20-205ENST00000610485 TXNP10599 105 aaKnown RBP14.94□□□□□ -0.02
SNX20-205ENST00000610485 EIF2AK2P19525 551 aaKnown RBP14.94□□□□□ -0.02
SNX20-205ENST00000610485 SMARCA1P28370 1054 aa14.94□□□□□ -0.02
SNX20-205ENST00000610485 KIF5BP33176 963 aa14.94□□□□□ -0.02
SNX20-205ENST00000610485 EPHB4P54760 987 aa14.94□□□□□ -0.02
SNX20-205ENST00000610485 PSMC6P62333 389 aa14.94□□□□□ -0.02
SNX20-205ENST00000610485 PURAQ00577 322 aaKnown RBP14.94□□□□□ -0.02
SNX20-205ENST00000610485 RNF20Q5VTR2 975 aa14.94□□□□□ -0.02
SNX20-205ENST00000610485 COPS5Q92905 334 aa14.94□□□□□ -0.02
SNX20-205ENST00000610485 CCDC69A6NI79 296 aa14.93□□□□□ -0.02
SNX20-205ENST00000610485 EIF3JO75822 258 aaKnown RBP14.93□□□□□ -0.02
SNX20-205ENST00000610485 NR3C2P08235 984 aa14.93□□□□□ -0.02
SNX20-205ENST00000610485 FPGSQ05932 587 aa14.93□□□□□ -0.02
SNX20-205ENST00000610485 TSGA10IPQ3SY00 556 aa14.93□□□□□ -0.02
SNX20-205ENST00000610485 BRDTQ58F21 947 aaPredicted RBP14.93□□□□□ -0.02
SNX20-205ENST00000610485 MFSD5Q6N075 450 aa14.93□□□□□ -0.02
SNX20-205ENST00000610485 NFXL1Q6ZNB6 911 aa14.93□□□□□ -0.02
SNX20-205ENST00000610485 LZTS2Q9BRK4 669 aa14.93□□□□□ -0.02
SNX20-205ENST00000610485 PDCD2LQ9BRP1 358 aa14.93□□□□□ -0.02
SNX20-205ENST00000610485 GCOM1H8Y6P7 765 aaPredicted RBP14.92□□□□□ -0.02
SNX20-205ENST00000610485 KPNA6O60684 536 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 MYL3P08590 195 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 POLR2MP0CAP2 368 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 CALM1P0DP23 149 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 CALM2P0DP24 149 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 CALM3P0DP25 149 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 HOXA13P31271 388 aaPredicted RBP14.92□□□□□ -0.02
SNX20-205ENST00000610485 GNAQP50148 359 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 SEPT14Q6ZU15 432 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 SGMS1Q86VZ5 419 aa14.92□□□□□ -0.02
SNX20-205ENST00000610485 MTG1Q9BT17 334 aaPredicted RBP14.92□□□□□ -0.02
SNX20-205ENST00000610485 B4GALT4O60513 344 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 PLEKHA8P1O95397 391 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 GH1P01241 217 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 ARHGAP1Q07960 439 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 PGM5Q15124 567 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 LY6KQ17RY6 165 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 VSIG10LQ86VR7 867 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 RASEFQ8IZ41 740 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 SRBD1Q8N5C6 995 aaKnown RBP14.91□□□□□ -0.02
SNX20-205ENST00000610485 RRP36Q96EU6 259 aaKnown RBP14.91□□□□□ -0.02
SNX20-205ENST00000610485 NEK1Q96PY6 1258 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 LRRC2Q9BYS8 371 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 TRPV6Q9H1D0 765 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 ALDH8A1Q9H2A2 487 aaPredicted RBP14.91□□□□□ -0.02
SNX20-205ENST00000610485 DDX41Q9UJV9 622 aaKnown RBP14.91□□□□□ -0.02
SNX20-205ENST00000610485 SLC12A7Q9Y666 1083 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 FRMPD4Q14CM0 1322 aa14.91□□□□□ -0.02
SNX20-205ENST00000610485 RGS20O76081 388 aa14.9□□□□□ -0.02
SNX20-205ENST00000610485 RXRAP19793 462 aa14.9□□□□□ -0.02
SNX20-205ENST00000610485 EXOSC10Q01780 885 aaKnown RBP14.9□□□□□ -0.02
SNX20-205ENST00000610485 PPIGQ13427 754 aaKnown RBP eCLIP14.9□□□□□ -0.02
SNX20-205ENST00000610485 FAM109BQ6ICB4 259 aaPredicted RBP14.9□□□□□ -0.02
SNX20-205ENST00000610485 TMEM199Q8N511 208 aa14.9□□□□□ -0.02
SNX20-205ENST00000610485 DEFB123Q8N688 67 aa14.9□□□□□ -0.02
SNX20-205ENST00000610485 IL31RAQ8NI17 732 aa14.9□□□□□ -0.02
SNX20-205ENST00000610485 PIBF1Q8WXW3 757 aa14.9□□□□□ -0.02
SNX20-205ENST00000610485 EMID1Q96A84 441 aaPredicted RBP14.9□□□□□ -0.02
SNX20-205ENST00000610485 PPP1R12CQ9BZL4 782 aa14.9□□□□□ -0.02
SNX20-205ENST00000610485 MRVI1Q9Y6F6 885 aa14.9□□□□□ -0.02
SNX20-205ENST00000610485 NEFLP07196 543 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms