RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 MTMR7Q9Y216 660 aa15.23■□□□□ 0.03
LINC01278-206ENST00000610088 MCM3APO60318 1980 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.22■□□□□ 0.03
LINC01278-206ENST00000610088 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 ZEB2O60315 1214 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 HSPD1P10809 573 aaKnown RBP15.22■□□□□ 0.03
LINC01278-206ENST00000610088 SDSP20132 328 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 SLC1A4P43007 532 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 IRX6P78412 446 aaPredicted RBP15.22■□□□□ 0.03
LINC01278-206ENST00000610088 TNFAIP2Q03169 654 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 ARMCX2Q7L311 632 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 SEZ6LQ9BYH1 1024 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 AP5M1Q9H0R1 490 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 ALDH8A1Q9H2A2 487 aaPredicted RBP15.22■□□□□ 0.03
LINC01278-206ENST00000610088 OSBPL3Q9H4L5 887 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 ANAPC4Q9UJX5 808 aa15.22■□□□□ 0.03
LINC01278-206ENST00000610088 MYH6P13533 1939 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 ASTN1O14525 1302 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 DCHS1Q96JQ0 3298 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 SOWAHBA6NEL2 793 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 TMEM221A6NGB7 291 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 TMEM232C9JQI7 657 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 M0R296 226 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 KRT37O76014 449 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 FGAP02671 866 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 FDX1P10109 184 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 PTGS1P23219 599 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 STAT2P52630 851 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 CWC27Q6UX04 472 aaKnown RBP15.21■□□□□ 0.03
LINC01278-206ENST00000610088 MFSD6Q6ZSS7 791 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 TLK2Q86UE8 772 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 FAM160B2Q86V87 743 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 TGS1Q96RS0 853 aaKnown RBP15.21■□□□□ 0.03
LINC01278-206ENST00000610088 INCENPQ9NQS7 918 aa15.21■□□□□ 0.03
LINC01278-206ENST00000610088 ZNF214Q9UL59 606 aaPredicted RBP15.21■□□□□ 0.03
LINC01278-206ENST00000610088 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.21■□□□□ 0.03
LINC01278-206ENST00000610088 CACNA1GO43497 2377 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 CACNA1BQ00975 2339 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 DYNC1LI2O43237 492 aaPredicted RBP15.2■□□□□ 0.02
LINC01278-206ENST00000610088 ORC4O43929 436 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 SUPT20HL2P0C7V6 817 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 MCCP23508 829 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 RFC2P35250 354 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 ID4P47928 161 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 HAND2P61296 217 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 CCDC96Q2M329 555 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 HERC4Q5GLZ8 1057 aaPredicted RBP15.2■□□□□ 0.02
LINC01278-206ENST00000610088 ZNF467Q7Z7K2 595 aaPredicted RBP15.2■□□□□ 0.02
LINC01278-206ENST00000610088 RNF135Q8IUD6 432 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 RETREG2Q8NC44 543 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 STAG1Q8WVM7 1258 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 EDAQ92838 391 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 RNF41Q9H4P4 317 aaPredicted RBP15.2■□□□□ 0.02
LINC01278-206ENST00000610088 RAVER2Q9HCJ3 691 aaKnown RBP15.2■□□□□ 0.02
LINC01278-206ENST00000610088 FBXO40Q9UH90 709 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 SCN5AQ14524 2016 aa15.2■□□□□ 0.02
LINC01278-206ENST00000610088 TECTAO75443 2155 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 TNKSO95271 1327 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 DNAJC25-GNG10A0A024R161 153 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 ZNF213O14771 459 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 FOXP2O15409 715 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 PCP11498 1178 aaKnown RBP15.19■□□□□ 0.02
LINC01278-206ENST00000610088 OAZ1P54368 228 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 ERVK-21P61565 698 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 NKX3-2P78367 333 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 PKN1Q16512 942 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 BMP8AQ7Z5Y6 402 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 ZNF589Q86UQ0 364 aaPredicted RBP15.19■□□□□ 0.02
LINC01278-206ENST00000610088 CCDC144CPQ8IYA2 1237 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 ANKRD35Q8N283 1001 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 REPS2Q8NFH8 660 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 GMCL1Q96IK5 515 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 SLC38A10Q9HBR0 1119 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 RIPK3Q9Y572 518 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 MYO15AQ9UKN7 3530 aa15.19■□□□□ 0.02
LINC01278-206ENST00000610088 ZMYM6O95789 1325 aa15.18■□□□□ 0.02
LINC01278-206ENST00000610088 NMT2O60551 498 aa15.18■□□□□ 0.02
LINC01278-206ENST00000610088 RCSD1Q6JBY9 416 aa15.18■□□□□ 0.02
LINC01278-206ENST00000610088 CHST13Q8NET6 341 aa15.18■□□□□ 0.02
LINC01278-206ENST00000610088 IL17RBQ9NRM6 502 aa15.18■□□□□ 0.02
LINC01278-206ENST00000610088 HOMER2Q9NSB8 354 aa15.18■□□□□ 0.02
LINC01278-206ENST00000610088 ATP2A1O14983 1001 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 BAIAP3O94812 1187 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 TOP1P11387 765 aaKnown RBP15.17■□□□□ 0.02
LINC01278-206ENST00000610088 WDR5P61964 334 aaKnown RBP15.17■□□□□ 0.02
LINC01278-206ENST00000610088 CLUL1Q15846 466 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 FAM47CQ5HY64 1035 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 FAM117BQ6P1L5 589 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 TRIM67Q6ZTA4 783 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 KCTD1Q719H9 257 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 ASCL5Q7RTU5 278 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 FBXO22Q8NEZ5 403 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 DCAF4Q8WV16 495 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 ESR2Q92731 530 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 PABPC5Q96DU9 382 aaKnown RBP15.17■□□□□ 0.02
LINC01278-206ENST00000610088 FGD4Q96M96 766 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 CLDND1Q9NY35 253 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 CTNNA3Q9UI47 895 aa15.17■□□□□ 0.02
LINC01278-206ENST00000610088 GNEQ9Y223 722 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms