RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 DUSP28Q4G0W2 176 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 ANO1Q5XXA6 986 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 PPP1R18Q6NYC8 613 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 RAB11FIP4Q86YS3 637 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 PCSK9Q8NBP7 692 aaKnown RBP16.46■□□□□ 0.23
HDDC2-209ENST00000609477 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 DIS3LQ8TF46 1054 aaKnown RBP16.46■□□□□ 0.23
HDDC2-209ENST00000609477 SCFD2Q8WU76 684 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 UPF3BQ9BZI7 483 aaKnown RBP16.46■□□□□ 0.23
HDDC2-209ENST00000609477 PXMP2Q9NR77 195 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 COL20A1Q9P218 1284 aa16.46■□□□□ 0.23
HDDC2-209ENST00000609477 GNEQ9Y223 722 aaKnown RBP16.46■□□□□ 0.23
HDDC2-209ENST00000609477 MOXD2PA6NHM9 499 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 STAM2O75886 525 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 NR3C2P08235 984 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 GJC2Q5T442 439 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-209ENST00000609477 FBXO16Q8IX29 292 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-209ENST00000609477 KLHDC9Q8NEP7 349 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 PIBF1Q8WXW3 757 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 DPF3Q92784 378 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 PSTPIP2Q9H939 334 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 PHF24Q9UPV7 400 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 NR2E3Q9Y5X4 410 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 V9GY48 417 aaPredicted RBP16.45■□□□□ 0.22
HDDC2-209ENST00000609477 SYNRGQ9UMZ2 1314 aa16.45■□□□□ 0.22
HDDC2-209ENST00000609477 PRPF3O43395 683 aaKnown RBP16.44■□□□□ 0.22
HDDC2-209ENST00000609477 SEC24BO95487 1268 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 PGK1P00558 417 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 IFNAR1P17181 557 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 ADCYAP1R1P41586 468 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 TTLL4Q14679 1199 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 C1orf53Q5VUE5 145 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 XRRA1Q6P2D8 792 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 KCNV1Q6PIU1 500 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 VSIG10LQ86VR7 867 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 SMARCC2Q8TAQ2 1214 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 PDCD2LQ9BRP1 358 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 RNF26Q9BY78 433 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-209ENST00000609477 WDR11Q9BZH6 1224 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 SENP6Q9GZR1 1112 aaPredicted RBP16.44■□□□□ 0.22
HDDC2-209ENST00000609477 AP5M1Q9H0R1 490 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 BARHL2Q9NY43 387 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 FRMPD4Q14CM0 1322 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 PDE4DIPQ5VU43 2346 aa16.44■□□□□ 0.22
HDDC2-209ENST00000609477 MEIS2O14770 477 aa16.43■□□□□ 0.22
HDDC2-209ENST00000609477 EVI5O60447 810 aa16.43■□□□□ 0.22
HDDC2-209ENST00000609477 C6orf222P0C671 652 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 SMPD1P17405 629 aa16.43■□□□□ 0.22
HDDC2-209ENST00000609477 HOXA13P31271 388 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 AKAP17AQ02040 695 aaKnown RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 PGM5Q15124 567 aa16.43■□□□□ 0.22
HDDC2-209ENST00000609477 NTRK3Q16288 839 aa16.43■□□□□ 0.22
HDDC2-209ENST00000609477 PFKFB3Q16875 520 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 PRPF38BQ5VTL8 546 aaKnown RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 CCSAPQ6IQ19 270 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 HEATR3Q7Z4Q2 680 aa16.43■□□□□ 0.22
HDDC2-209ENST00000609477 TLK2Q86UE8 772 aa16.43■□□□□ 0.22
HDDC2-209ENST00000609477 CCDC12Q8WUD4 166 aaPredicted RBP16.43■□□□□ 0.22
HDDC2-209ENST00000609477 PDGFCQ9NRA1 345 aa16.43■□□□□ 0.22
HDDC2-209ENST00000609477 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.42■□□□□ 0.22
HDDC2-209ENST00000609477 ADCY6O43306 1168 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 ZEB2O60315 1214 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 TGFB3P10600 412 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 SCG2P13521 617 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 EIF2AK2P19525 551 aaKnown RBP16.42■□□□□ 0.22
HDDC2-209ENST00000609477 CCND2P30279 289 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 BRDTQ58F21 947 aaPredicted RBP16.42■□□□□ 0.22
HDDC2-209ENST00000609477 GNASQ5JWF2 1037 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 FAM177A1Q8N128 213 aaPredicted RBP16.42■□□□□ 0.22
HDDC2-209ENST00000609477 SEZ6LQ9BYH1 1024 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 KIAA1217Q5T5P2 1943 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 ELP1O95163 1332 aa16.42■□□□□ 0.22
HDDC2-209ENST00000609477 CPLX1O14810 134 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 CABYRO75952 493 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 FOSP01100 380 aaPredicted RBP16.41■□□□□ 0.22
HDDC2-209ENST00000609477 MYCNP04198 464 aaPredicted RBP16.41■□□□□ 0.22
HDDC2-209ENST00000609477 TXNP10599 105 aaKnown RBP16.41■□□□□ 0.22
HDDC2-209ENST00000609477 ACLYP53396 1101 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 NAPAP54920 295 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 SNX17Q15036 470 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 KCNA10Q16322 511 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 WWC2Q6AWC2 1192 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 CCDC62Q6P9F0 684 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 USP17L6PQ6QN14 398 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 SLC39A5Q6ZMH5 540 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 FCHSD1Q86WN1 690 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 TRIM22Q8IYM9 498 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 EHMT1Q9H9B1 1298 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 UPF2Q9HAU5 1272 aaKnown RBP16.41■□□□□ 0.22
HDDC2-209ENST00000609477 RIC8AQ9NPQ8 531 aa16.41■□□□□ 0.22
HDDC2-209ENST00000609477 A0A1W2PQ45 241 aaPredicted RBP16.4■□□□□ 0.22
HDDC2-209ENST00000609477 A0A1W2PQY0 241 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 hCG_1642624A0A1W2PR95 340 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 ESYT2A0FGR8 921 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 SPDYE3A6NKU9 549 aa16.4■□□□□ 0.22
HDDC2-209ENST00000609477 STXBP3O00186 592 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms