RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 ATAD5Q96QE3 1844 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
LINC01278-204ENST00000609143 RHOBTB3O94955 611 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 SFPQP23246 707 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC01278-204ENST00000609143 GRB10Q13322 594 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 KMT5BQ4FZB7 885 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 LRRC15Q8TF66 581 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 MBOAT7Q96N66 472 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 C7orf25Q9BPX7 421 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 TRIM9Q9C026 710 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.85□□□□□ -0.35
LINC01278-204ENST00000609143 FEM1BQ9UK73 627 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 PCDHA12Q9UN75 941 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 PHF20L1A8MW92 1017 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 KLRC4O43908 158 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 SKILP12757 684 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 KIF4BQ2VIQ3 1234 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 TBC1D10BQ4KMP7 808 aaPredicted RBP12.85□□□□□ -0.35
LINC01278-204ENST00000609143 CDKAL1Q5VV42 579 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 SV2BQ7L1I2 683 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 SAMD7Q7Z3H4 446 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 KIFC2Q96AC6 838 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 RANBP17Q9H2T7 1088 aaKnown RBP12.85□□□□□ -0.35
LINC01278-204ENST00000609143 GDAQ9Y2T3 454 aa12.85□□□□□ -0.35
LINC01278-204ENST00000609143 PIK3CDO00329 1044 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 SREBF1P36956 1147 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 ASIC1P78348 528 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 SLFN12Q8IYM2 578 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 CRYGNQ8WXF5 182 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 PNMA5Q96PV4 448 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 CTAGE1Q96RT6 745 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 LRRC27Q9C0I9 530 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 EXOC1Q9NV70 894 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 HACL1Q9UJ83 578 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 SCAF8Q9UPN6 1271 aaKnown RBP12.84□□□□□ -0.35
LINC01278-204ENST00000609143 KDM3AQ9Y4C1 1321 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 ADSSL1Q8N142 457 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 LARP4BQ92615 738 aaKnown RBP12.84□□□□□ -0.35
LINC01278-204ENST00000609143 KCNMB3Q9NPA1 279 aa12.84□□□□□ -0.35
LINC01278-204ENST00000609143 OPLAHO14841 1288 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 SLC26A4O43511 780 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 PRCPP42785 496 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 CCZ1BP86790 482 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 CCZ1P86791 482 aaPredicted RBP12.83□□□□□ -0.36
LINC01278-204ENST00000609143 SPAG1Q07617 926 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 CCDC174Q6PII3 467 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 GIMAP8Q8ND71 665 aaPredicted RBP12.83□□□□□ -0.36
LINC01278-204ENST00000609143 NLGN2Q8NFZ4 835 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
LINC01278-204ENST00000609143 INTS13Q9NVM9 706 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.36
LINC01278-204ENST00000609143 PSMA7O14818 248 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 TBX3O15119 743 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 CTNND1O60716 968 aaKnown RBP12.83□□□□□ -0.36
LINC01278-204ENST00000609143 PPP1R2P41236 205 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 PRELPP51888 382 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 Q4G0T1 1027 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 FILIP1LQ4L180 1135 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 TMEM119Q4V9L6 283 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 ARMCX5Q6P1M9 558 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 CCDC84Q86UT8 332 aaPredicted RBP12.83□□□□□ -0.36
LINC01278-204ENST00000609143 ANKRD20A12PQ8NF67 263 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 RAD54LQ92698 747 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 NT5C3AQ9H0P0 336 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 DEFB129Q9H1M3 183 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 BLOC1S4Q9NUP1 217 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 ZNF541Q9H0D2 1346 aa12.83□□□□□ -0.36
LINC01278-204ENST00000609143 A0A1B0GTH6 734 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 H7C1D1 291 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
LINC01278-204ENST00000609143 PDE4DQ08499 809 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 DCAF15Q66K64 600 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 LPAR1Q92633 364 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 HOOK2Q96ED9 719 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 P2RX7Q99572 595 aaKnown RBP12.82□□□□□ -0.36
LINC01278-204ENST00000609143 PRDM4Q9UKN5 801 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
LINC01278-204ENST00000609143 ABCB11O95342 1321 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 GCOM1H8Y6P7 765 aaPredicted RBP12.82□□□□□ -0.36
LINC01278-204ENST00000609143 WDR46O15213 610 aaKnown RBP12.82□□□□□ -0.36
LINC01278-204ENST00000609143 POLR2MP0CAP2 368 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 TAL1P17542 331 aaPredicted RBP12.82□□□□□ -0.36
LINC01278-204ENST00000609143 CIITAP33076 1130 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 CCT6AP40227 531 aaKnown RBP12.82□□□□□ -0.36
LINC01278-204ENST00000609143 PRR16Q569H4 304 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 SPECC1LQ69YQ0 1117 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 CNNM4Q6P4Q7 775 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 EHMT1Q9H9B1 1298 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 MAPK8IP1Q9UQF2 711 aa12.82□□□□□ -0.36
LINC01278-204ENST00000609143 CFBP00751 764 aa12.81□□□□□ -0.36
LINC01278-204ENST00000609143 CYP3A4P08684 503 aa12.81□□□□□ -0.36
LINC01278-204ENST00000609143 MCM6Q14566 821 aa12.81□□□□□ -0.36
LINC01278-204ENST00000609143 NR1I3Q14994 352 aa12.81□□□□□ -0.36
LINC01278-204ENST00000609143 SAMD1Q6SPF0 538 aaPredicted RBP12.81□□□□□ -0.36
LINC01278-204ENST00000609143 DHTKD1Q96HY7 919 aaPredicted RBP12.81□□□□□ -0.36
LINC01278-204ENST00000609143 NUDT12Q9BQG2 462 aa12.81□□□□□ -0.36
LINC01278-204ENST00000609143 KIAA1683Q9H0B3 1180 aa12.81□□□□□ -0.36
LINC01278-204ENST00000609143 ASTN2O75129 1339 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms