RNA–Protein interactions for RNA: ENST00000608945.1

ITGB5-213, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 267 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-213ENST00000608945 CTSHP09668 335 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 CD38P28907 300 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 GBP2P32456 591 aaPredicted RBP3.08□□□□□ -1.92
ITGB5-213ENST00000608945 PDE4BQ07343 736 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 CACNB2Q08289 660 aaPredicted RBP3.08□□□□□ -1.92
ITGB5-213ENST00000608945 KLHL22Q53GT1 634 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 TCTN3Q6NUS6 607 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 HS2ST1Q7LGA3 356 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 TMEM87AQ8NBN3 555 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 SYTL5Q8TDW5 730 aaPredicted RBP3.08□□□□□ -1.92
ITGB5-213ENST00000608945 CPA5Q8WXQ8 436 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 TMEM87BQ96K49 555 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 GGT7Q9UJ14 662 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 SNCAIPQ9Y6H5 919 aa3.08□□□□□ -1.92
ITGB5-213ENST00000608945 F8W031 263 aaPredicted RBP3.07□□□□□ -1.92
ITGB5-213ENST00000608945 LMNB2Q03252 620 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 SEPT6Q14141 434 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 MRPL58Q14197 206 aaKnown RBP3.07□□□□□ -1.92
ITGB5-213ENST00000608945 TSNAXIP1Q2TAA8 658 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 WIPI1Q5MNZ9 446 aaPredicted RBP3.07□□□□□ -1.92
ITGB5-213ENST00000608945 AGBL4Q5VU57 503 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 CCDC84Q86UT8 332 aaPredicted RBP3.07□□□□□ -1.92
ITGB5-213ENST00000608945 LINC00116Q8NCU8 138 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 JARID2Q92833 1246 aaPredicted RBP3.07□□□□□ -1.92
ITGB5-213ENST00000608945 TMEM74Q96NL1 305 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 GNRHR2Q96P88 292 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 C11orf84Q9BUA3 381 aaPredicted RBP3.07□□□□□ -1.92
ITGB5-213ENST00000608945 RSRP1Q9BUV0 290 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 TLR6Q9Y2C9 796 aa3.07□□□□□ -1.92
ITGB5-213ENST00000608945 SYPP08247 313 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 TFE3P19532 575 aaPredicted RBP3.06□□□□□ -1.92
ITGB5-213ENST00000608945 GJA4P35212 333 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 ZNF76P36508 570 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 PCBP3P57721 371 aaKnown RBP3.06□□□□□ -1.92
ITGB5-213ENST00000608945 KRTAP10-12P60413 245 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 RPL6Q02878 288 aaKnown RBP3.06□□□□□ -1.92
ITGB5-213ENST00000608945 CAMK2GQ13555 558 aaPredicted RBP3.06□□□□□ -1.92
ITGB5-213ENST00000608945 SNAP47Q5SQN1 464 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 ADGRG3Q86Y34 549 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 PHC3Q8NDX5 983 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 GAL3ST3Q96A11 431 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 PCDHB5Q9Y5E4 795 aa3.06□□□□□ -1.92
ITGB5-213ENST00000608945 CNTNAP2Q9UHC6 1331 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 MINDY4BA8MYZ0 360 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 F6X3S4 739 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 SCAMP3O14828 347 aaKnown RBP3.05□□□□□ -1.92
ITGB5-213ENST00000608945 PGRP06401 933 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 CHMP4BP1P59074 171 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 MLECQ14165 292 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 CWF19L2Q2TBE0 894 aaKnown RBP3.05□□□□□ -1.92
ITGB5-213ENST00000608945 SLC6A19Q695T7 634 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 LAIR1Q6GTX8 287 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 GOLM1Q8NBJ4 401 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 TMEM52Q8NDY8 209 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 RIOX1Q9H6W3 641 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 METTL5Q9NRN9 209 aaKnown RBP3.05□□□□□ -1.92
ITGB5-213ENST00000608945 RNF7Q9UBF6 113 aa3.05□□□□□ -1.92
ITGB5-213ENST00000608945 SUPT16HQ9Y5B9 1047 aaKnown RBP3.05□□□□□ -1.92
ITGB5-213ENST00000608945 PF4P02776 101 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 C8BP07358 591 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 VAMP1P23763 118 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 EIF4A3P38919 411 aaKnown RBP3.04□□□□□ -1.92
ITGB5-213ENST00000608945 YARSP54577 528 aaKnown RBP3.04□□□□□ -1.92
ITGB5-213ENST00000608945 FAM160A1Q05DH4 1040 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 NMIQ13287 307 aaPredicted RBP3.04□□□□□ -1.92
ITGB5-213ENST00000608945 MPP2Q14168 576 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 BNC2Q6ZN30 1099 aaPredicted RBP3.04□□□□□ -1.92
ITGB5-213ENST00000608945 Q6ZSN1 163 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 ERMP1Q7Z2K6 904 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 KBTBD2Q8IY47 623 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 DAGLBQ8NCG7 672 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 RGS22Q8NE09 1264 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 GATAD2BQ8WXI9 593 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 RNF34Q969K3 372 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 MRRFQ96E11 262 aaKnown RBP3.04□□□□□ -1.92
ITGB5-213ENST00000608945 RHOVQ96L33 236 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 ADGRE3Q9BY15 652 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 BACH2Q9BYV9 841 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 KBTBD4Q9NVX7 518 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 PODXL2Q9NZ53 605 aa3.04□□□□□ -1.92
ITGB5-213ENST00000608945 ROBO2Q9HCK4 1378 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 GFRA2O00451 464 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 F13A1P00488 732 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 PLCG1P19174 1290 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 POU4F1Q01851 419 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 FAM196AQ6ZSG2 479 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 REC114Q7Z4M0 266 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 USP48Q86UV5 1035 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 KIAA0825Q8IV33 1275 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 ENOX1Q8TC92 643 aaKnown RBP3.03□□□□□ -1.92
ITGB5-213ENST00000608945 ADAM30Q9UKF2 790 aa3.03□□□□□ -1.92
ITGB5-213ENST00000608945 COL3A1P02461 1466 aaPredicted RBP3.03□□□□□ -1.93
ITGB5-213ENST00000608945 TLR3O15455 904 aaKnown RBP3.02□□□□□ -1.93
ITGB5-213ENST00000608945 RECKO95980 971 aa3.02□□□□□ -1.93
ITGB5-213ENST00000608945 MCM4P33991 863 aa3.02□□□□□ -1.93
ITGB5-213ENST00000608945 FANCCQ00597 558 aa3.02□□□□□ -1.93
ITGB5-213ENST00000608945 APOBRQ0VD83 1088 aa3.02□□□□□ -1.93
ITGB5-213ENST00000608945 KRTAP27-1Q3LI81 207 aa3.02□□□□□ -1.93
ITGB5-213ENST00000608945 KYQ8NBH2 561 aa3.02□□□□□ -1.93
ITGB5-213ENST00000608945 FAM13CQ8NE31 585 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms