RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 TMEM145Q8NBT3 493 aa6.92□□□□□ -1.3
HDDC2-207ENST00000608532 ALG3Q92685 438 aa6.92□□□□□ -1.3
HDDC2-207ENST00000608532 CCDC140Q96MF4 163 aa6.92□□□□□ -1.3
HDDC2-207ENST00000608532 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.92□□□□□ -1.39e-6■□□□□ 10.7
HDDC2-207ENST00000608532 NUDT5Q9UKK9 219 aa6.92□□□□□ -1.3
HDDC2-207ENST00000608532 PLA2G2DQ9UNK4 145 aa6.92□□□□□ -1.3
HDDC2-207ENST00000608532 SIT1Q9Y3P8 196 aa6.92□□□□□ -1.3
HDDC2-207ENST00000608532 PCDHA5Q9Y5H7 936 aa6.92□□□□□ -1.3
HDDC2-207ENST00000608532 MYO1BO43795 1136 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 PFKLP17858 780 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 GFRA1P56159 465 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 RPL11P62913 178 aaKnown RBP6.91□□□□□ -1.3
HDDC2-207ENST00000608532 KCNAB2Q13303 367 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 WWC2Q6AWC2 1192 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 LCNL1Q6ZST4 164 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 CCDC103Q8IW40 242 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 PEX11GQ96HA9 241 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 C8orf37Q96NL8 207 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 IER2Q9BTL4 223 aa6.91□□□□□ -1.3
HDDC2-207ENST00000608532 TIMM13Q9Y5L4 95 aaPredicted RBP6.91□□□□□ -1.3
HDDC2-207ENST00000608532 IQCA1LA6NCM1 817 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 C22orf46C9J442 243 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 ARNTLO00327 626 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 FPR2P25090 351 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 BCL6P41182 706 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 LIMS1P48059 325 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 HSP90AA2PQ14568 343 aaPredicted RBP6.9□□□□□ -1.3
HDDC2-207ENST00000608532 E4F1Q66K89 784 aaPredicted RBP6.9□□□□□ -1.3
HDDC2-207ENST00000608532 CNKSR3Q6P9H4 555 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 CEP68Q76N32 757 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 NETO2Q8NC67 525 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 KREMEN2Q8NCW0 462 aa6.9□□□□□ -1.3
HDDC2-207ENST00000608532 SCG5P05408 212 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 LCP1P13796 627 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 LTBRP36941 435 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 TARBP2Q15633 366 aaKnown RBP6.89□□□□□ -1.31
HDDC2-207ENST00000608532 TCERG1LQ5VWI1 586 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 DENND5AQ6IQ26 1287 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 RCBTB1Q8NDN9 531 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 PLEKHO2Q8TD55 490 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 KCTD13Q8WZ19 329 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 TRMT2BQ96GJ1 504 aaKnown RBP6.89□□□□□ -1.31
HDDC2-207ENST00000608532 FAN1Q9Y2M0 1017 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 PCDHA2Q9Y5H9 948 aa6.89□□□□□ -1.31
HDDC2-207ENST00000608532 IRS4O14654 1257 aaPredicted RBP6.88□□□□□ -1.31
HDDC2-207ENST00000608532 PRODHO43272 600 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 AFF3P51826 1226 aaKnown RBP6.88□□□□□ -1.31
HDDC2-207ENST00000608532 VMACQ2NL98 169 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 ACBD5Q5T8D3 534 aaPredicted RBP6.88□□□□□ -1.31
HDDC2-207ENST00000608532 SPOCD1Q6ZMY3 1216 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 USP53Q70EK8 1073 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 TMEFF1Q8IYR6 380 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 ST13P5Q8NFI4 369 aaPredicted RBP6.88□□□□□ -1.31
HDDC2-207ENST00000608532 PWWP2AQ96N64 755 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 AARSD1Q9BTE6 412 aaKnown RBP6.88□□□□□ -1.31
HDDC2-207ENST00000608532 KRTAP9-9Q9BYP9 154 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 KRTAP9-4Q9BYQ2 154 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 AP5M1Q9H0R1 490 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 EPB41L4AQ9HCS5 686 aaPredicted RBP6.88□□□□□ -1.31
HDDC2-207ENST00000608532 PFDN2Q9UHV9 154 aa6.88□□□□□ -1.31
HDDC2-207ENST00000608532 ASGR2P07307 311 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 PMLP29590 882 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 MC3RP41968 323 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 RBM10P98175 930 aaKnown RBP6.87□□□□□ -1.31
HDDC2-207ENST00000608532 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 SLC35F1Q5T1Q4 408 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 FAM129CQ86XR2 697 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 DCP2Q8IU60 420 aaKnown RBP6.87□□□□□ -1.31
HDDC2-207ENST00000608532 SIAH1Q8IUQ4 282 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 TMEM151BQ8IW70 566 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 TSPAN17Q96FV3 270 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 C1orf159Q96HA4 380 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 TMEM169Q96HH4 297 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 SGSM3Q96HU1 749 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 FBXL7Q9UJT9 491 aa6.87□□□□□ -1.31
HDDC2-207ENST00000608532 IRS2Q9Y4H2 1338 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 PDPK1O15530 556 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 DLX3O60479 287 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 NCAM1P13591 858 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 ATF2P15336 505 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 GTF2A2P52657 109 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 MAP4K2Q12851 820 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 SLC9A5Q14940 896 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 MTERF2Q49AM1 385 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 SPATC1Q76KD6 591 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 NLRP10Q86W26 655 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 LRRC47Q8N1G4 583 aaKnown RBP6.86□□□□□ -1.31
HDDC2-207ENST00000608532 HIRIP3Q9BW71 556 aaPredicted RBP6.86□□□□□ -1.31
HDDC2-207ENST00000608532 ARHGEF4Q9NR80 690 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 CLDND1Q9NY35 253 aa6.86□□□□□ -1.31
HDDC2-207ENST00000608532 COA3Q9Y2R0 106 aaPredicted RBP6.86□□□□□ -1.31
HDDC2-207ENST00000608532 TRAV20A0A0B4J274 112 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 ZBTB7AO95365 584 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 BMP7P18075 431 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 FBLN1P23142 703 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 FOXO4P98177 505 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 LSAMPQ13449 338 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 FBLN7Q53RD9 439 aa6.85□□□□□ -1.31
HDDC2-207ENST00000608532 YOD1Q5VVQ6 348 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms