RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 CTAGE5O15320 804 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 ARIH2O95376 493 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 CALM1P0DP23 149 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 CALM2P0DP24 149 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 CALM3P0DP25 149 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 CASTP20810 708 aaKnown RBP16.76■□□□□ 0.27
HDDC2-204ENST00000608295 EDNRBP24530 442 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 CHMP4BP1P59074 171 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 PSMC6P62333 389 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 TLE2Q04725 743 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 APOBRQ0VD83 1088 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 FSCN1Q16658 493 aaKnown RBP16.76■□□□□ 0.27
HDDC2-204ENST00000608295 GLT1D1Q96MS3 346 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 SPZ1Q9BXG8 430 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 PXMP2Q9NR77 195 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 PRKAG2Q9UGJ0 569 aa16.76■□□□□ 0.27
HDDC2-204ENST00000608295 MOXD2PA6NHM9 499 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 ZBTB43O43298 467 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 PPFIA3O75145 1194 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 TXNP10599 105 aaKnown RBP16.75■□□□□ 0.27
HDDC2-204ENST00000608295 CST5P28325 142 aaPredicted RBP16.75■□□□□ 0.27
HDDC2-204ENST00000608295 HSD17B4P51659 736 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 EXOSC10Q01780 885 aaKnown RBP16.75■□□□□ 0.27
HDDC2-204ENST00000608295 RTN1Q16799 776 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 ERICH6BQ5W0A0 696 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 CCSAPQ6IQ19 270 aaPredicted RBP16.75■□□□□ 0.27
HDDC2-204ENST00000608295 BLOC1S2Q6QNY1 142 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 Q6ZUG5 572 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 TMTC3Q6ZXV5 915 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 TMTC2Q8N394 836 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 FANCBQ8NB91 859 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 NSUN6Q8TEA1 469 aaKnown RBP16.75■□□□□ 0.27
HDDC2-204ENST00000608295 BRF1Q92994 677 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 MTA3Q9BTC8 594 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 PDLIM7Q9NR12 457 aa16.75■□□□□ 0.27
HDDC2-204ENST00000608295 MYH7BA7E2Y1 1941 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 CNTNAP5Q8WYK1 1306 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 GCOM1H8Y6P7 765 aaPredicted RBP16.74■□□□□ 0.27
HDDC2-204ENST00000608295 MYL3P08590 195 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 POLR2MP0CAP2 368 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 SNX17Q15036 470 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 LY6KQ17RY6 165 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 DUSP28Q4G0W2 176 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 IQSEC1Q6DN90 963 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 HEATR3Q7Z4Q2 680 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 PCSK9Q8NBP7 692 aaKnown RBP16.74■□□□□ 0.27
HDDC2-204ENST00000608295 RGS22Q8NE09 1264 aa16.74■□□□□ 0.27
HDDC2-204ENST00000608295 TSEN34Q9BSV6 310 aaKnown RBP16.74■□□□□ 0.27
HDDC2-204ENST00000608295 UBE2OQ9C0C9 1292 aaKnown RBP16.74■□□□□ 0.27
HDDC2-204ENST00000608295 B4DLN1 442 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 GNAQP50148 359 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 MRPL12P52815 198 aaKnown RBP16.73■□□□□ 0.27
HDDC2-204ENST00000608295 STXBP2Q15833 593 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 UBE2SQ16763 222 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 TSGA10IPQ3SY00 556 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 USP17L6PQ6QN14 398 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 SGMS1Q86VZ5 419 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 SCFD2Q8WU76 684 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 MAP3K14Q99558 947 aa16.73■□□□□ 0.27
HDDC2-204ENST00000608295 LBHD1Q9BQE6 289 aaPredicted RBP16.73■□□□□ 0.27
HDDC2-204ENST00000608295 LARP6Q9BRS8 491 aaKnown RBP16.73■□□□□ 0.27
HDDC2-204ENST00000608295 UPF3BQ9BZI7 483 aaKnown RBP16.73■□□□□ 0.27
HDDC2-204ENST00000608295 A0A0U1RQG5 324 aaPredicted RBP16.72■□□□□ 0.27
HDDC2-204ENST00000608295 TRIM43BA6NCK2 446 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 NR3C2P08235 984 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 CLTBP09497 229 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 RPS6KB1P23443 525 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 CDC27P30260 824 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 TTLL4Q14679 1199 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 PGM5Q15124 567 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 SMARCC2Q8TAQ2 1214 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 TRIM43Q96BQ3 446 aaPredicted RBP16.72■□□□□ 0.27
HDDC2-204ENST00000608295 GDF15Q99988 308 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 LZTS2Q9BRK4 669 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 PDCD2LQ9BRP1 358 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 MRVI1Q9Y6F6 885 aa16.72■□□□□ 0.27
HDDC2-204ENST00000608295 LOC102724159A0A0B4J2E5 919 aa16.71■□□□□ 0.27
HDDC2-204ENST00000608295 HMGB1P09429 215 aaKnown RBP16.71■□□□□ 0.27
HDDC2-204ENST00000608295 METAP2P50579 478 aaKnown RBP eCLIP16.71■□□□□ 0.27
HDDC2-204ENST00000608295 PWP2Q15269 919 aaKnown RBP16.71■□□□□ 0.27
HDDC2-204ENST00000608295 BADQ92934 168 aa16.71■□□□□ 0.27
HDDC2-204ENST00000608295 KCNB2Q92953 911 aa16.71■□□□□ 0.27
HDDC2-204ENST00000608295 PPP1R12CQ9BZL4 782 aa16.71■□□□□ 0.27
HDDC2-204ENST00000608295 PRO3102Q9H379 93 aa16.71■□□□□ 0.27
HDDC2-204ENST00000608295 TMEM39AQ9NV64 488 aa16.71■□□□□ 0.27
HDDC2-204ENST00000608295 RBM47A0AV96 593 aaKnown RBP16.7■□□□□ 0.26
HDDC2-204ENST00000608295 ITGB8P26012 769 aa16.7■□□□□ 0.26
HDDC2-204ENST00000608295 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
HDDC2-204ENST00000608295 TRAF1Q13077 416 aa16.7■□□□□ 0.26
HDDC2-204ENST00000608295 WWC2Q6AWC2 1192 aa16.7■□□□□ 0.26
HDDC2-204ENST00000608295 AFG1LQ8WV93 481 aa16.7■□□□□ 0.26
HDDC2-204ENST00000608295 CUL5Q93034 780 aa16.7■□□□□ 0.26
HDDC2-204ENST00000608295 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
HDDC2-204ENST00000608295 RBM28Q9NW13 759 aaKnown RBP16.7■□□□□ 0.26
HDDC2-204ENST00000608295 DCDC2CA8MYV0 355 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 ZEB2O60315 1214 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 CCND2P30279 289 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 ADD1P35611 737 aaKnown RBP16.69■□□□□ 0.26
HDDC2-204ENST00000608295 NAPAP54920 295 aa16.69■□□□□ 0.26
HDDC2-204ENST00000608295 CCT2P78371 535 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms