RNA–Protein interactions for RNA: ENST00000607187.1

CTSA-215, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 509 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-215ENST00000607187 LENG1Q96BZ8 264 aaPredicted RBP11.6□□□□□ -0.55
CTSA-215ENST00000607187 NEK1Q96PY6 1258 aa11.6□□□□□ -0.55
CTSA-215ENST00000607187 PHOX2BQ99453 314 aa11.6□□□□□ -0.55
CTSA-215ENST00000607187 MAP3K14Q99558 947 aa11.6□□□□□ -0.55
CTSA-215ENST00000607187 SENP6Q9GZR1 1112 aaPredicted RBP11.6□□□□□ -0.55
CTSA-215ENST00000607187 RIOX1Q9H6W3 641 aa11.6□□□□□ -0.55
CTSA-215ENST00000607187 XPNPEP3Q9NQH7 507 aa11.6□□□□□ -0.55
CTSA-215ENST00000607187 ADD3Q9UEY8 706 aaKnown RBP11.6□□□□□ -0.55
CTSA-215ENST00000607187 NR2E3Q9Y5X4 410 aa11.6□□□□□ -0.55
CTSA-215ENST00000607187 DDX49Q9Y6V7 483 aaKnown RBP11.6□□□□□ -0.55
CTSA-215ENST00000607187 KIAA1217Q5T5P2 1943 aa11.6□□□□□ -0.55
CTSA-215ENST00000607187 ZBTB5O15062 677 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 CYTH3O43739 400 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 PPP1R11O60927 126 aaPredicted RBP11.59□□□□□ -0.55
CTSA-215ENST00000607187 DUSP11O75319 330 aaKnown RBP11.59□□□□□ -0.55
CTSA-215ENST00000607187 PGK1P00558 417 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 CALML3P27482 149 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 ALDH5A1P51649 535 aaPredicted RBP11.59□□□□□ -0.55
CTSA-215ENST00000607187 ATN1P54259 1190 aaPredicted RBP11.59□□□□□ -0.55
CTSA-215ENST00000607187 LRRC26Q2I0M4 334 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 SLC30A10Q6XR72 485 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 RNF180Q86T96 592 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 SGMS1Q86VZ5 419 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 NUP133Q8WUM0 1156 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 KCNB2Q92953 911 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 CCDC97Q96F63 343 aaPredicted RBP11.59□□□□□ -0.55
CTSA-215ENST00000607187 MRPL11Q9Y3B7 192 aaKnown RBP11.59□□□□□ -0.55
CTSA-215ENST00000607187 SYNRGQ9UMZ2 1314 aa11.59□□□□□ -0.55
CTSA-215ENST00000607187 KBTBD13C9JR72 458 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 ADAMTS4O75173 837 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 HSPA4P34932 840 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 EXOSC10Q01780 885 aaKnown RBP11.58□□□□□ -0.56
CTSA-215ENST00000607187 KRT32Q14532 448 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 ADCK5Q3MIX3 580 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 TAPT1Q6NXT6 567 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 DHX32Q7L7V1 743 aaKnown RBP11.58□□□□□ -0.56
CTSA-215ENST00000607187 MCF2L2Q86YR7 1114 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 KLHDC9Q8NEP7 349 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 DNERQ8NFT8 737 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 TBC1D5Q92609 795 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 MYL10Q9BUA6 226 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 AMNQ9BXJ7 453 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 LRRC2Q9BYS8 371 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 VTA1Q9NP79 307 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 PHF24Q9UPV7 400 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 SZT2Q5T011 3432 aa11.58□□□□□ -0.56
CTSA-215ENST00000607187 CCDC69A6NI79 296 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 OPLAHO14841 1288 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 REC8O95072 547 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 EDNRBP24530 442 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 SMARCA1P28370 1054 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 KIF5BP33176 963 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 ADCYAP1R1P41586 468 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 GJA9P57773 515 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 NKX3-2P78367 333 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 CCSAPQ6IQ19 270 aaPredicted RBP11.57□□□□□ -0.56
CTSA-215ENST00000607187 NFXL1Q6ZNB6 911 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 EEPD1Q7L9B9 569 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 HOMER1Q86YM7 354 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 C7orf61Q8IZ16 206 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
CTSA-215ENST00000607187 SYTL5Q8TDW5 730 aaPredicted RBP11.57□□□□□ -0.56
CTSA-215ENST00000607187 PIGSQ96S52 555 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 LZTS2Q9BRK4 669 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 TSEN34Q9BSV6 310 aaKnown RBP11.57□□□□□ -0.56
CTSA-215ENST00000607187 TRAIPQ9BWF2 469 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 SPZ1Q9BXG8 430 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 UPF3AQ9H1J1 476 aaKnown RBP11.57□□□□□ -0.56
CTSA-215ENST00000607187 PDGFCQ9NRA1 345 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 POLR3EQ9NVU0 708 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 COL20A1Q9P218 1284 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 GNEQ9Y223 722 aaKnown RBP11.57□□□□□ -0.56
CTSA-215ENST00000607187 SLC12A7Q9Y666 1083 aa11.57□□□□□ -0.56
CTSA-215ENST00000607187 PNMA6FA0A0J9YX94 578 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.56□□□□□ -0.56
CTSA-215ENST00000607187 MYADML2A6NDP7 307 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 EPB41L2O43491 1005 aaKnown RBP11.56□□□□□ -0.56
CTSA-215ENST00000607187 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
CTSA-215ENST00000607187 CALM1P0DP23 149 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 CALM2P0DP24 149 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 CALM3P0DP25 149 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 CST5P28325 142 aaPredicted RBP11.56□□□□□ -0.56
CTSA-215ENST00000607187 GNAQP50148 359 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 HSD17B4P51659 736 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 GHRHRQ02643 423 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 TNFAIP2Q03169 654 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 TRAF1Q13077 416 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 SNX17Q15036 470 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 IER5LQ5T953 404 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 IQSEC1Q6DN90 963 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 SLC39A5Q6ZMH5 540 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 FBXO16Q8IX29 292 aaPredicted RBP11.56□□□□□ -0.56
CTSA-215ENST00000607187 TCEANC2Q96MN5 208 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 MPHOSPH6Q99547 160 aaKnown RBP11.56□□□□□ -0.56
CTSA-215ENST00000607187 MAP3K20Q9NYL2 800 aaKnown RBP11.56□□□□□ -0.56
CTSA-215ENST00000607187 PCDHA1Q9Y5I3 950 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 MYH7BA7E2Y1 1941 aa11.56□□□□□ -0.56
CTSA-215ENST00000607187 A0A1W2PQ45 241 aaPredicted RBP11.55□□□□□ -0.56
CTSA-215ENST00000607187 A0A1W2PQY0 241 aa11.55□□□□□ -0.56
CTSA-215ENST00000607187 RBM47A0AV96 593 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms