RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 POLR2MP0CAP2 368 aa16.67■□□□□ 0.26
TUBE1-208ENST00000604743 CASTP20810 708 aaKnown RBP16.67■□□□□ 0.26
TUBE1-208ENST00000604743 SMARCA1P28370 1054 aa16.67■□□□□ 0.26
TUBE1-208ENST00000604743 HSD17B4P51659 736 aa16.67■□□□□ 0.26
TUBE1-208ENST00000604743 FCHSD1Q86WN1 690 aa16.67■□□□□ 0.26
TUBE1-208ENST00000604743 TSEN34Q9BSV6 310 aaKnown RBP16.67■□□□□ 0.26
TUBE1-208ENST00000604743 USP26Q9BXU7 913 aa16.67■□□□□ 0.26
TUBE1-208ENST00000604743 MAF1Q9H063 256 aa16.67■□□□□ 0.26
TUBE1-208ENST00000604743 UPF3AQ9H1J1 476 aaKnown RBP16.67■□□□□ 0.26
TUBE1-208ENST00000604743 STARD7Q9NQZ5 370 aa16.67■□□□□ 0.26
TUBE1-208ENST00000604743 MYH7BA7E2Y1 1941 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 MOXD2PA6NHM9 499 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 GOLGA8AA7E2F4 631 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 GOLGA8BA8MQT2 603 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 ASGR1P07306 291 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 EDNRBP24530 442 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 PSMA5P28066 241 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 APOBRQ0VD83 1088 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 RTN1Q16799 776 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 TRIM60Q495X7 471 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 CCSAPQ6IQ19 270 aaPredicted RBP16.66■□□□□ 0.26
TUBE1-208ENST00000604743 SEPT14Q6ZU15 432 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 TMTC3Q6ZXV5 915 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 PCSK9Q8NBP7 692 aaKnown RBP16.66■□□□□ 0.26
TUBE1-208ENST00000604743 BRF1Q92994 677 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 PXMP2Q9NR77 195 aa16.66■□□□□ 0.26
TUBE1-208ENST00000604743 MYCLP12524 364 aaPredicted RBP16.65■□□□□ 0.26
TUBE1-208ENST00000604743 RPS6KB1P23443 525 aa16.65■□□□□ 0.26
TUBE1-208ENST00000604743 CST5P28325 142 aaPredicted RBP16.65■□□□□ 0.26
TUBE1-208ENST00000604743 STXBP2Q15833 593 aa16.65■□□□□ 0.26
TUBE1-208ENST00000604743 FSCN1Q16658 493 aaKnown RBP16.65■□□□□ 0.26
TUBE1-208ENST00000604743 DUSP28Q4G0W2 176 aa16.65■□□□□ 0.26
TUBE1-208ENST00000604743 COPS5Q92905 334 aa16.65■□□□□ 0.26
TUBE1-208ENST00000604743 GLT1D1Q96MS3 346 aa16.65■□□□□ 0.26
TUBE1-208ENST00000604743 IWS1Q96ST2 819 aa16.65■□□□□ 0.26
TUBE1-208ENST00000604743 PRDM5Q9NQX1 630 aaPredicted RBP16.65■□□□□ 0.26
TUBE1-208ENST00000604743 RBM28Q9NW13 759 aaKnown RBP16.65■□□□□ 0.26
TUBE1-208ENST00000604743 MAP3K20Q9NYL2 800 aaKnown RBP16.65■□□□□ 0.26
TUBE1-208ENST00000604743 RBM47A0AV96 593 aaKnown RBP16.64■□□□□ 0.25
TUBE1-208ENST00000604743 CTAGE5O15320 804 aa16.64■□□□□ 0.25
TUBE1-208ENST00000604743 NR3C2P08235 984 aa16.64■□□□□ 0.25
TUBE1-208ENST00000604743 TXNP10599 105 aaKnown RBP16.64■□□□□ 0.25
TUBE1-208ENST00000604743 PPP2R5BQ15173 497 aa16.64■□□□□ 0.25
TUBE1-208ENST00000604743 OR6J1Q8NGC5 347 aa16.64■□□□□ 0.25
TUBE1-208ENST00000604743 SCFD2Q8WU76 684 aa16.64■□□□□ 0.25
TUBE1-208ENST00000604743 ZFP91Q96JP5 570 aaPredicted RBP16.64■□□□□ 0.25
TUBE1-208ENST00000604743 PRKAG2Q9UGJ0 569 aa16.64■□□□□ 0.25
TUBE1-208ENST00000604743 TRIOBPQ9H2D6 2365 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 EPB41L2O43491 1005 aaKnown RBP16.63■□□□□ 0.25
TUBE1-208ENST00000604743 ZEB2O60315 1214 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 PQBP1O60828 265 aaKnown RBP16.63■□□□□ 0.25
TUBE1-208ENST00000604743 METAP2P50579 478 aaKnown RBP eCLIP16.63■□□□□ 0.25
TUBE1-208ENST00000604743 GHRHRQ02643 423 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 TLE2Q04725 743 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 TTLL4Q14679 1199 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 SNX17Q15036 470 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 CXCL17Q6UXB2 119 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 SAMD3Q8N6K7 520 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 SMARCC2Q8TAQ2 1214 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 GPKOWQ92917 476 aaPredicted RBP eCLIP16.63■□□□□ 0.256e-6■■□□□ 12
TUBE1-208ENST00000604743 CUL5Q93034 780 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 RBM27Q9P2N5 1060 aaKnown RBP16.63■□□□□ 0.25
TUBE1-208ENST00000604743 Q9Y3F1 56 aa16.63■□□□□ 0.25
TUBE1-208ENST00000604743 ARIH2O95376 493 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 CDC27P30260 824 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 MAGEA10P43363 369 aaPredicted RBP16.62■□□□□ 0.25
TUBE1-208ENST00000604743 MDM2Q00987 491 aaPredicted RBP16.62■□□□□ 0.25
TUBE1-208ENST00000604743 PGM5Q15124 567 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 LY6KQ17RY6 165 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 HABP4Q5JVS0 413 aaKnown RBP16.62■□□□□ 0.25
TUBE1-208ENST00000604743 USP17L6PQ6QN14 398 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 HEATR3Q7Z4Q2 680 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 PDCD2LQ9BRP1 358 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 CNTNAP5Q8WYK1 1306 aa16.62■□□□□ 0.25
TUBE1-208ENST00000604743 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
TUBE1-208ENST00000604743 EIF3JO75822 258 aaKnown RBP16.61■□□□□ 0.25
TUBE1-208ENST00000604743 MYL3P08590 195 aa16.61■□□□□ 0.25
TUBE1-208ENST00000604743 ADD1P35611 737 aaKnown RBP16.61■□□□□ 0.25
TUBE1-208ENST00000604743 NKX3-2P78367 333 aa16.61■□□□□ 0.25
TUBE1-208ENST00000604743 C1orf53Q5VUE5 145 aa16.61■□□□□ 0.25
TUBE1-208ENST00000604743 SH3RF1Q7Z6J0 888 aa16.61■□□□□ 0.25
TUBE1-208ENST00000604743 IL31RAQ8NI17 732 aa16.61■□□□□ 0.25
TUBE1-208ENST00000604743 UPF3BQ9BZI7 483 aaKnown RBP16.61■□□□□ 0.25
TUBE1-208ENST00000604743 ZSWIM6Q9HCJ5 1215 aa16.61■□□□□ 0.25
TUBE1-208ENST00000604743 FAM217BQ9NTX9 383 aaPredicted RBP16.61■□□□□ 0.25
TUBE1-208ENST00000604743 CYP46A1Q9Y6A2 500 aa16.61■□□□□ 0.25
TUBE1-208ENST00000604743 V9GY48 417 aaPredicted RBP16.61■□□□□ 0.25
TUBE1-208ENST00000604743 A0A0U1RQG5 324 aaPredicted RBP16.6■□□□□ 0.25
TUBE1-208ENST00000604743 CCND2P30279 289 aa16.6■□□□□ 0.25
TUBE1-208ENST00000604743 LBHD1Q9BQE6 289 aaPredicted RBP16.6■□□□□ 0.25
TUBE1-208ENST00000604743 LARP6Q9BRS8 491 aaKnown RBP16.6■□□□□ 0.25
TUBE1-208ENST00000604743 PSTPIP2Q9H939 334 aa16.6■□□□□ 0.25
TUBE1-208ENST00000604743 PDLIM7Q9NR12 457 aa16.6■□□□□ 0.25
TUBE1-208ENST00000604743 MRVI1Q9Y6F6 885 aa16.6■□□□□ 0.25
TUBE1-208ENST00000604743 ELP1O95163 1332 aa16.6■□□□□ 0.25
TUBE1-208ENST00000604743 DOCK5Q9H7D0 1870 aa16.59■□□□□ 0.25
TUBE1-208ENST00000604743 ARVCFO00192 962 aa16.59■□□□□ 0.25
TUBE1-208ENST00000604743 MEIS2O14770 477 aa16.59■□□□□ 0.25
TUBE1-208ENST00000604743 SORBS3O60504 671 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms