RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ENC1O14682 589 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 MMP10P09238 476 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 DNM2P50570 870 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 BMS1Q14692 1282 aaKnown RBP13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 MIIPQ5JXC2 388 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 HAS1Q92839 578 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CDC23Q9UJX2 597 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 PRDM4Q9UKN5 801 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CAPN11Q9UMQ6 739 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ADAMTSL1Q8N6G6 1762 aa13.18□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 A0A1W2PQC6 194 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 DDTLA6NHG4 134 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CRKP46108 304 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CHMP4BP1P59074 171 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ZSCAN29Q8IWY8 852 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 DNAJC7Q99615 494 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 PSTPIP2Q9H939 334 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 MAGEF1Q9HAY2 307 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 RIC8AQ9NPQ8 531 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ARGLU1Q9NWB6 273 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 MARCH6O60337 910 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 SASH3O75995 380 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 NPR1P16066 1061 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 TAL1P17542 331 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 TMEM266Q2M3C6 531 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CNNM4Q6P4Q7 775 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 GPR161Q8N6U8 529 aaKnown RBP13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 DDX12PQ92771 950 aa13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 DDX25Q9UHL0 483 aaKnown RBP13.17□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 BICDL2A1A5D9 508 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ZBTB5O15062 677 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 SSBP05455 408 aaKnown RBP eCLIP13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 HLA-DOAP06340 250 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 PLA2G4AP47712 749 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CYP27A1Q02318 531 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 KRT79Q5XKE5 535 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 SRGAP1Q7Z6B7 1085 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 GOLGA1Q92805 767 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 TBC1D7Q9P0N9 293 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 HDAC6Q9UBN7 1215 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 EEF2P13639 858 aaKnown RBP13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 HERVK_113P62684 666 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 RAD51AP2Q09MP3 1159 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 TSR1Q2NL82 804 aaKnown RBP13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 TMC4Q7Z404 712 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CUL5Q93034 780 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 TTYH3Q9C0H2 523 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 SWAP70Q9UH65 585 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 SUGT1Q9Y2Z0 365 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 DUSP10Q9Y6W6 482 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 RCCD1A6NED2 376 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 EPHB6O15197 1021 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 PLEKP08567 350 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CACNB1Q02641 598 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 NCAPH2Q6IBW4 605 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CENPPQ6IPU0 288 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CC2D1AQ6P1N0 951 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 NLGN1Q8N2Q7 840 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 RAD54LQ92698 747 aa13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 NAPGQ99747 312 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 FAM207AQ9NSI2 230 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 LTBP1Q14766 1721 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CLK2P49760 499 aaKnown RBP13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 QRICH1Q2TAL8 776 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 HHIPL2Q6UWX4 724 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 UNC13DQ70J99 1090 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CCDC155Q8N6L0 562 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 LACRTQ9GZZ8 138 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 PCDHA12Q9UN75 941 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 GDF11O95390 407 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 RHOXF2BP0C7M4 288 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ALDH1B1P30837 517 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 SLC1A4P43007 532 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 MRPL12P52815 198 aaKnown RBP13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 SEPT2Q15019 361 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 CCDC122Q5T0U0 273 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 SH3BP5LQ7L8J4 393 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 NOC3LQ8WTT2 800 aaKnown RBP13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 FGFBP2Q9BYJ0 223 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 PCDHA1Q9Y5I3 950 aa13.15□□□□□ -0.3
HMGN3-AS1-201ENST00000604516 ANKRD31Q8N7Z5 1873 aa13.15□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 MYH7BA7E2Y1 1941 aa13.15□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 PDIA5Q14554 519 aa13.14□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 KRT26Q7Z3Y9 468 aa13.14□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 RAB34Q9BZG1 259 aa13.14□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 ANKZF1Q9H8Y5 726 aa13.14□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 NHEJ1Q9H9Q4 299 aaPredicted RBP13.14□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 FAM198AQ9UFP1 575 aa13.14□□□□□ -0.31
HMGN3-AS1-201ENST00000604516 NPHP3-ACAD11A0A0J9YXS1 232 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms