RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 NEFLP07196 543 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 PTGS1P23219 599 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 MCM5P33992 734 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 BEX3Q00994 111 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 PDE4DQ08499 809 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 COL9A3Q14050 684 aaPredicted RBP13.41□□□□□ -0.26
ZNF544-219ENST00000602260 TMEM63BQ5T3F8 832 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 MFSD5Q6N075 450 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 TLK2Q86UE8 772 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 MPHOSPH6Q99547 160 aaKnown RBP13.41□□□□□ -0.26
ZNF544-219ENST00000602260 WDR11Q9BZH6 1224 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 AP5M1Q9H0R1 490 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 TTYH1Q9H313 450 aaPredicted RBP13.41□□□□□ -0.26
ZNF544-219ENST00000602260 LY9Q9HBG7 655 aa13.41□□□□□ -0.26
ZNF544-219ENST00000602260 SPTBN5Q9NRC6 3674 aaKnown RBP13.41□□□□□ -0.26
ZNF544-219ENST00000602260 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.4□□□□□ -0.26
ZNF544-219ENST00000602260 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.4□□□□□ -0.26
ZNF544-219ENST00000602260 RBM47A0AV96 593 aaKnown RBP13.4□□□□□ -0.26
ZNF544-219ENST00000602260 B4DLN1 442 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 SH2B2O14492 632 aaPredicted RBP13.4□□□□□ -0.26
ZNF544-219ENST00000602260 CYTH3O43739 400 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 FOSL2P15408 326 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 CDK7P50613 346 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 MRPL12P52815 198 aaKnown RBP13.4□□□□□ -0.26
ZNF544-219ENST00000602260 EPHB4P54760 987 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 FSCN1Q16658 493 aaKnown RBP13.4□□□□□ -0.26
ZNF544-219ENST00000602260 DUSP28Q4G0W2 176 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 RNF20Q5VTR2 975 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 PSRC1Q6PGN9 363 aaPredicted RBP13.4□□□□□ -0.26
ZNF544-219ENST00000602260 ZNF654Q8IZM8 581 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 TMEM199Q8N511 208 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 VTI1AQ96AJ9 217 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 TAAR1Q96RJ0 339 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 PIGSQ96S52 555 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 COL20A1Q9P218 1284 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
ZNF544-219ENST00000602260 OPLAHO14841 1288 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 ZEB2O60315 1214 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 DDAH1O94760 285 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 DNAJB2P25686 324 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 TRAF1Q13077 416 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 CXCL17Q6UXB2 119 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 NFXL1Q6ZNB6 911 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 HOMER1Q86YM7 354 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 FAM126BQ8IXS8 530 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 NSUN6Q8TEA1 469 aaKnown RBP13.39□□□□□ -0.27
ZNF544-219ENST00000602260 MYLIPQ8WY64 445 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 RMDN3Q96TC7 470 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 MYL10Q9BUA6 226 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 COL25A1Q9BXS0 654 aaPredicted RBP13.39□□□□□ -0.27
ZNF544-219ENST00000602260 LCTP09848 1927 aa13.39□□□□□ -0.27
ZNF544-219ENST00000602260 PNMA6FA0A0J9YX94 578 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 CFBP00751 764 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 KIF5BP33176 963 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 LIFRP42702 1097 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 HSD17B4P51659 736 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 GHRHRQ02643 423 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 TSGA10IPQ3SY00 556 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 CTCFLQ8NI51 663 aaPredicted RBP13.38□□□□□ -0.27
ZNF544-219ENST00000602260 SCFD2Q8WU76 684 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 IWS1Q96ST2 819 aa13.38□□□□□ -0.27
ZNF544-219ENST00000602260 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.38□□□□□ -0.273e-6■■■■■ 30.2
ZNF544-219ENST00000602260 MTIF3Q9H2K0 278 aaKnown RBP13.38□□□□□ -0.27
ZNF544-219ENST00000602260 MAP3K20Q9NYL2 800 aaKnown RBP13.38□□□□□ -0.27
ZNF544-219ENST00000602260 CCDC69A6NI79 296 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 NKRFO15226 690 aaKnown RBP eCLIP13.37□□□□□ -0.27
ZNF544-219ENST00000602260 SMARCA1P28370 1054 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 GNAQP50148 359 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 PPP2R5BQ15173 497 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 ARHGEF16Q5VV41 709 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 RASEFQ8IZ41 740 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 SAMD3Q8N6K7 520 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 SLC43A3Q8NBI5 491 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 NEK1Q96PY6 1258 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 LZTS2Q9BRK4 669 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 SPZ1Q9BXG8 430 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 LRRC2Q9BYS8 371 aa13.37□□□□□ -0.27
ZNF544-219ENST00000602260 TTC28Q96AY4 2481 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 CHD9Q3L8U1 2897 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 GCOM1H8Y6P7 765 aaPredicted RBP13.36□□□□□ -0.27
ZNF544-219ENST00000602260 CD4P01730 458 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 NR3C2P08235 984 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 POLR2MP0CAP2 368 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 CALM1P0DP23 149 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 CALM2P0DP24 149 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 CALM3P0DP25 149 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 TXNP10599 105 aaKnown RBP13.36□□□□□ -0.27
ZNF544-219ENST00000602260 EIF2AK2P19525 551 aaKnown RBP13.36□□□□□ -0.27
ZNF544-219ENST00000602260 EXOSC10Q01780 885 aaKnown RBP13.36□□□□□ -0.27
ZNF544-219ENST00000602260 TTLL4Q14679 1199 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 STXBP2Q15833 593 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 TMEM240Q5SV17 173 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 RASIP1Q5U651 963 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 CCDC62Q6P9F0 684 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 SGMS1Q86VZ5 419 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 OR6J1Q8NGC5 347 aa13.36□□□□□ -0.27
ZNF544-219ENST00000602260 PIBF1Q8WXW3 757 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms