RNA–Protein interactions for RNA: ENST00000601662.5

USE1-210, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 4

Gene USE1, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-210ENST00000601662 CCDC148Q8NFR7 591 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 CLEC4DQ8WXI8 215 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 FGD4Q96M96 766 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 GLT8D2Q9H1C3 349 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 BARHL2Q9NY43 387 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 CYP39A1Q9NYL5 469 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 ZHX1Q9UKY1 873 aaPredicted RBP16.59■□□□□ 0.25
USE1-210ENST00000601662 OGDHLQ9ULD0 1010 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 DDX49Q9Y6V7 483 aaKnown RBP16.59■□□□□ 0.25
USE1-210ENST00000601662 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
USE1-210ENST00000601662 PFASO15067 1338 aa16.59■□□□□ 0.25
USE1-210ENST00000601662 SEPT4O43236 478 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 STX6O43752 255 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 SYT1P21579 422 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 SAFBQ15424 915 aaKnown RBP eCLIP16.58■□□□□ 0.24
USE1-210ENST00000601662 PPP1R18Q6NYC8 613 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 TEX2Q8IWB9 1127 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 FAM133AQ8N9E0 248 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 DPF3Q92784 378 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.58■□□□□ 0.24
USE1-210ENST00000601662 CHMP5Q9NZZ3 219 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 PCDHA1Q9Y5I3 950 aa16.58■□□□□ 0.24
USE1-210ENST00000601662 MSCO60682 206 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 DTNBO60941 627 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 GNA11P29992 359 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 DDIT3P35638 169 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 NLRP5P59047 1200 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 MAMDC4Q6UXC1 1216 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 RNF207Q6ZRF8 634 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 ARMCX2Q7L311 632 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 NECAB2Q7Z6G3 386 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 ZNF467Q7Z7K2 595 aaPredicted RBP16.57■□□□□ 0.24
USE1-210ENST00000601662 MSL3Q8N5Y2 521 aaKnown RBP16.57■□□□□ 0.24
USE1-210ENST00000601662 TBC1D5Q92609 795 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 AIFM3Q96NN9 605 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 BRMS1Q9HCU9 246 aa16.57■□□□□ 0.24
USE1-210ENST00000601662 MRPL11Q9Y3B7 192 aaKnown RBP16.57■□□□□ 0.24
USE1-210ENST00000601662 MKI67P46013 3256 aaKnown RBP16.57■□□□□ 0.24
USE1-210ENST00000601662 ABCB11O95342 1321 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 SYNGAP1Q96PV0 1343 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 STXBP3O00186 592 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 ZNF865P0CJ78 1059 aaPredicted RBP16.56■□□□□ 0.24
USE1-210ENST00000601662 CAPN2P17655 700 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 NAPAP54920 295 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 KRT40Q6A162 431 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 WWC2Q6AWC2 1192 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 SLC30A10Q6XR72 485 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 UBE2Q1Q7Z7E8 422 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 ANKLE1Q8NAG6 615 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 MAF1Q9H063 256 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 C6orf50Q9HD87 102 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 VPS54Q9P1Q0 977 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 NRBP1Q9UHY1 535 aa16.56■□□□□ 0.24
USE1-210ENST00000601662 TNRC18O15417 2968 aaPredicted RBP16.56■□□□□ 0.24
USE1-210ENST00000601662 ESYT2A0FGR8 921 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 RARBP10826 455 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 MNX1P50219 401 aaPredicted RBP16.55■□□□□ 0.24
USE1-210ENST00000601662 MRPL12P52815 198 aaKnown RBP16.55■□□□□ 0.24
USE1-210ENST00000601662 RPS6P62753 249 aaKnown RBP16.55■□□□□ 0.24
USE1-210ENST00000601662 ACVR2BQ13705 512 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 GJC2Q5T442 439 aaPredicted RBP16.55■□□□□ 0.24
USE1-210ENST00000601662 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 SAMD3Q8N6K7 520 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 GPKOWQ92917 476 aaPredicted RBP eCLIP16.55■□□□□ 0.24
USE1-210ENST00000601662 LENG1Q96BZ8 264 aaPredicted RBP16.55■□□□□ 0.24
USE1-210ENST00000601662 HTATIP2Q9BUP3 242 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 PHF20Q9BVI0 1012 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 ZMYND12Q9H0C1 365 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 C11orf49Q9H6J7 331 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 FAM184BQ9ULE4 1060 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 MCM3APO60318 1980 aa16.55■□□□□ 0.24
USE1-210ENST00000601662 ASTN1O14525 1302 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 VPS37CA5D8V6 355 aaPredicted RBP16.54■□□□□ 0.24
USE1-210ENST00000601662 SMCO2A6NFE2 343 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 ASB14A6NK59 587 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 PPP1R11O60927 126 aaPredicted RBP16.54■□□□□ 0.24
USE1-210ENST00000601662 MMP1P03956 469 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 AKR1A1P14550 325 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 MCTP2Q6DN12 878 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 ARRDC4Q8NCT1 418 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 ABHD16BQ9H3Z7 469 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 ZSCAN16Q9H4T2 348 aaPredicted RBP16.54■□□□□ 0.24
USE1-210ENST00000601662 ADD3Q9UEY8 706 aaKnown RBP16.54■□□□□ 0.24
USE1-210ENST00000601662 MYH6P13533 1939 aa16.54■□□□□ 0.24
USE1-210ENST00000601662 PGK1P00558 417 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 CFBP00751 764 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 ZSCAN22P10073 491 aaPredicted RBP16.53■□□□□ 0.24
USE1-210ENST00000601662 FOSBP53539 338 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 GNL2Q13823 731 aaKnown RBP16.53■□□□□ 0.24
USE1-210ENST00000601662 CCDC144BQ3MJ40 725 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 MCF2L2Q86YR7 1114 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 DAGLBQ8NCG7 672 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 FOXP1Q9H334 677 aaPredicted RBP16.53■□□□□ 0.24
USE1-210ENST00000601662 PSTPIP2Q9H939 334 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 RIC8AQ9NPQ8 531 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 XPNPEP3Q9NQH7 507 aa16.53■□□□□ 0.24
USE1-210ENST00000601662 MAP3K20Q9NYL2 800 aaKnown RBP16.53■□□□□ 0.24
USE1-210ENST00000601662 PCDHA4Q9UN74 947 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms