RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 SYN1P17600 705 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 RCAN1P53805 252 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 FSCN1Q16658 493 aaKnown RBP19.9■□□□□ 0.78
HERC3-214ENST00000601319 NOL8Q76FK4 1167 aaKnown RBP19.9■□□□□ 0.78
HERC3-214ENST00000601319 GLT1D1Q96MS3 346 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 TAAR1Q96RJ0 339 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 WDR11Q9BZH6 1224 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 AP5M1Q9H0R1 490 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 STARD7Q9NQZ5 370 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 RBM27Q9P2N5 1060 aaKnown RBP19.9■□□□□ 0.78
HERC3-214ENST00000601319 SNX14Q9Y5W7 946 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 MYH7BA7E2Y1 1941 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 SCN10AQ9Y5Y9 1956 aa19.9■□□□□ 0.78
HERC3-214ENST00000601319 IRX5P78411 483 aaPredicted RBP19.89■□□□□ 0.77
HERC3-214ENST00000601319 PPP2R5BQ15173 497 aa19.89■□□□□ 0.77
HERC3-214ENST00000601319 SYNE3Q6ZMZ3 975 aa19.89■□□□□ 0.77
HERC3-214ENST00000601319 TMTC3Q6ZXV5 915 aa19.89■□□□□ 0.77
HERC3-214ENST00000601319 ANKRD33Q7Z3H0 272 aa19.89■□□□□ 0.77
HERC3-214ENST00000601319 MICU3Q86XE3 530 aa19.89■□□□□ 0.77
HERC3-214ENST00000601319 SRBD1Q8N5C6 995 aaKnown RBP19.89■□□□□ 0.77
HERC3-214ENST00000601319 FANCBQ8NB91 859 aa19.89■□□□□ 0.77
HERC3-214ENST00000601319 PXMP2Q9NR77 195 aa19.89■□□□□ 0.77
HERC3-214ENST00000601319 SEC63Q9UGP8 760 aaKnown RBP19.89■□□□□ 0.77
HERC3-214ENST00000601319 NID2Q14112 1375 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 FRMPD4Q14CM0 1322 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 MROH7Q68CQ1 1323 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 CABYRO75952 493 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 RXRAP19793 462 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 MAGEA10P43363 369 aaPredicted RBP19.88■□□□□ 0.77
HERC3-214ENST00000601319 ARHGEF16Q5VV41 709 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 FBXL16Q8N461 479 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 TCEANC2Q96MN5 208 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 TOX2Q96NM4 488 aa19.88■□□□□ 0.77
HERC3-214ENST00000601319 RBM28Q9NW13 759 aaKnown RBP19.88■□□□□ 0.77
HERC3-214ENST00000601319 LAMA3Q16787 3333 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 GCOM1H8Y6P7 765 aaPredicted RBP19.87■□□□□ 0.77
HERC3-214ENST00000601319 DYNC1LI2O43237 492 aaPredicted RBP19.87■□□□□ 0.77
HERC3-214ENST00000601319 POLR2MP0CAP2 368 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 BEX3Q00994 111 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 TLE2Q04725 743 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 STXBP2Q15833 593 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 TMEM63BQ5T3F8 832 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 JAKMIP1Q96N16 626 aaKnown RBP19.87■□□□□ 0.77
HERC3-214ENST00000601319 PDLIM7Q9NR12 457 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 PRKAG2Q9UGJ0 569 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 BRPF3Q9ULD4 1205 aa19.87■□□□□ 0.77
HERC3-214ENST00000601319 A0A0U1RQG5 324 aaPredicted RBP19.86■□□□□ 0.77
HERC3-214ENST00000601319 ZBTB43O43298 467 aa19.86■□□□□ 0.77
HERC3-214ENST00000601319 ZEB2O60315 1214 aa19.86■□□□□ 0.77
HERC3-214ENST00000601319 EIF3JO75822 258 aaKnown RBP19.86■□□□□ 0.77
HERC3-214ENST00000601319 EIF2AK2P19525 551 aaKnown RBP19.86■□□□□ 0.77
HERC3-214ENST00000601319 CPT1AP50416 773 aa19.86■□□□□ 0.77
HERC3-214ENST00000601319 TTLL4Q14679 1199 aa19.86■□□□□ 0.77
HERC3-214ENST00000601319 CCDC62Q6P9F0 684 aa19.86■□□□□ 0.77
HERC3-214ENST00000601319 BLOC1S2Q6QNY1 142 aa19.86■□□□□ 0.77
HERC3-214ENST00000601319 PDCD2LQ9BRP1 358 aa19.86■□□□□ 0.77
HERC3-214ENST00000601319 SEZ6LQ9BYH1 1024 aa19.86■□□□□ 0.77
HERC3-214ENST00000601319 CNTNAP5Q8WYK1 1306 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 PIK3CDO00329 1044 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 NR3C2P08235 984 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 CLTBP09497 229 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 PTGS1P23219 599 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 HOXA13P31271 388 aaPredicted RBP19.85■□□□□ 0.77
HERC3-214ENST00000601319 CDK7P50613 346 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 RTN1Q16799 776 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 RAB11FIP4Q86YS3 637 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
HERC3-214ENST00000601319 LAMA2P24043 3122 aaKnown RBP19.84■□□□□ 0.77
HERC3-214ENST00000601319 KLF18A0A0U1RQI7 1052 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 ARVCFO00192 962 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 PQBP1O60828 265 aaKnown RBP19.84■□□□□ 0.77
HERC3-214ENST00000601319 ARIH2O95376 493 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 TXNP10599 105 aaKnown RBP19.84■□□□□ 0.77
HERC3-214ENST00000601319 RPS6KB1P23443 525 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 PSMA5P28066 241 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 PGM5Q15124 567 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 CXCL17Q6UXB2 119 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 CMTR1Q8N1G2 835 aaKnown RBP19.84■□□□□ 0.77
HERC3-214ENST00000601319 SLC43A3Q8NBI5 491 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 OR6J1Q8NGC5 347 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 PIBF1Q8WXW3 757 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 POLR3EQ9NVU0 708 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 DOCK5Q9H7D0 1870 aa19.84■□□□□ 0.77
HERC3-214ENST00000601319 A6NJR5 290 aa19.83■□□□□ 0.77
HERC3-214ENST00000601319 DCDC2CA8MYV0 355 aa19.83■□□□□ 0.77
HERC3-214ENST00000601319 KIAA0355O15063 1070 aa19.83■□□□□ 0.77
HERC3-214ENST00000601319 FXR1P51114 621 aaKnown RBP eCLIP19.83■□□□□ 0.77
HERC3-214ENST00000601319 FUT2Q10981 343 aa19.83■□□□□ 0.77
HERC3-214ENST00000601319 BRDTQ58F21 947 aaPredicted RBP19.83■□□□□ 0.77
HERC3-214ENST00000601319 VSIG10LQ86VR7 867 aa19.83■□□□□ 0.77
HERC3-214ENST00000601319 TEX2Q8IWB9 1127 aa19.83■□□□□ 0.77
HERC3-214ENST00000601319 LBHD1Q9BQE6 289 aaPredicted RBP19.83■□□□□ 0.77
HERC3-214ENST00000601319 USP26Q9BXU7 913 aa19.83■□□□□ 0.77
HERC3-214ENST00000601319 PRDM5Q9NQX1 630 aaPredicted RBP19.83■□□□□ 0.77
HERC3-214ENST00000601319 TANC1Q9C0D5 1861 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 GOLGA8AA7E2F4 631 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 GOLGA8BA8MQT2 603 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 KPNA6O60684 536 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 SLC34A2O95436 690 aa19.82■□□□□ 0.76
HERC3-214ENST00000601319 CPA1P15085 419 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms