RNA–Protein interactions for RNA: ENST00000600447.1

PPFIA4-212, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 385 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-212ENST00000600447 RMDN3Q96TC7 470 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 SEZ6LQ9BYH1 1024 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 MAP3K20Q9NYL2 800 aaKnown RBP16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 COL20A1Q9P218 1284 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 TBX21Q9UL17 535 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 PCDHA1Q9Y5I3 950 aa16.73■□□□□ 0.27
PPFIA4-212ENST00000600447 CYTH3O43739 400 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 DDAH1O94760 285 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 CFBP00751 764 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 CPT1AP50416 773 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 FAM126BQ8IXS8 530 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 ZNF654Q8IZM8 581 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 TMTC2Q8N394 836 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 TMEM87BQ96K49 555 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 PIGSQ96S52 555 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 POLR3EQ9NVU0 708 aa16.72■□□□□ 0.27
PPFIA4-212ENST00000600447 SCN10AQ9Y5Y9 1956 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 PNMA6FA0A0J9YX94 578 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 SH2B2O14492 632 aaPredicted RBP16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 TLR3O15455 904 aaKnown RBP16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 CDC45O75419 566 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 ITGA7Q13683 1181 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 TTLL4Q14679 1199 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 STXBP2Q15833 593 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 RNF20Q5VTR2 975 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 HOMER1Q86YM7 354 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 OR6J1Q8NGC5 347 aa16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 GPHNQ9NQX3 736 aaPredicted RBP16.71■□□□□ 0.27
PPFIA4-212ENST00000600447 GRIN2DO15399 1336 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 MYH7BA7E2Y1 1941 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 TIMP1P01033 207 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 CD4P01730 458 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 TXNP10599 105 aaKnown RBP16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 SMARCA1P28370 1054 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 KIF5BP33176 963 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 LIFRP42702 1097 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 FPGSQ05932 587 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 SHHQ15465 462 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 BRDTQ58F21 947 aaPredicted RBP16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 ARHGEF16Q5VV41 709 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 CTCFLQ8NI51 663 aaPredicted RBP16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 SPZ1Q9BXG8 430 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
PPFIA4-212ENST00000600447 COL6A3P12111 3177 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 CCDC69A6NI79 296 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 A6NJR5 290 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 ARIH2O95376 493 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 EIF2AK2P19525 551 aaKnown RBP16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 PURAQ00577 322 aaKnown RBP16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 COL9A3Q14050 684 aaPredicted RBP16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 C9orf50Q5SZB4 431 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 CCDC62Q6P9F0 684 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 NFXL1Q6ZNB6 911 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 MYL10Q9BUA6 226 aa16.69■□□□□ 0.26
PPFIA4-212ENST00000600447 KPNA6O60684 536 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 EIF3JO75822 258 aaKnown RBP16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 NR3C2P08235 984 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 CALM1P0DP23 149 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 CALM2P0DP24 149 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 CALM3P0DP25 149 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 GNAQP50148 359 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 PSMC6P62333 389 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 MFSD5Q6N075 450 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 SEPT14Q6ZU15 432 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 COPS5Q92905 334 aa16.68■□□□□ 0.26
PPFIA4-212ENST00000600447 GCOM1H8Y6P7 765 aaPredicted RBP16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 MYL3P08590 195 aa16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 POLR2MP0CAP2 368 aa16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 HOXA13P31271 388 aaPredicted RBP16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 EPHB4P54760 987 aa16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 TSGA10IPQ3SY00 556 aa16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 RRP36Q96EU6 259 aaKnown RBP16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 PDCD2LQ9BRP1 358 aa16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 MTG1Q9BT17 334 aaPredicted RBP16.67■□□□□ 0.26
PPFIA4-212ENST00000600447 GH1P01241 217 aa16.66■□□□□ 0.26
PPFIA4-212ENST00000600447 LY6KQ17RY6 165 aa16.66■□□□□ 0.26
PPFIA4-212ENST00000600447 SGMS1Q86VZ5 419 aa16.66■□□□□ 0.26
PPFIA4-212ENST00000600447 DEFB123Q8N688 67 aa16.66■□□□□ 0.26
PPFIA4-212ENST00000600447 LRRC2Q9BYS8 371 aa16.66■□□□□ 0.26
PPFIA4-212ENST00000600447 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
PPFIA4-212ENST00000600447 DDX41Q9UJV9 622 aaKnown RBP16.66■□□□□ 0.26
PPFIA4-212ENST00000600447 SLC12A7Q9Y666 1083 aa16.66■□□□□ 0.26
PPFIA4-212ENST00000600447 B4GALT4O60513 344 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 PLEKHA8P1O95397 391 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 ARHGAP1Q07960 439 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 PPIGQ13427 754 aaKnown RBP eCLIP16.65■□□□□ 0.264e-6■■■■□ 21.6
PPFIA4-212ENST00000600447 PGM5Q15124 567 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 FAM109BQ6ICB4 259 aaPredicted RBP16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 VSIG10LQ86VR7 867 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 TMEM199Q8N511 208 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 SRBD1Q8N5C6 995 aaKnown RBP16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 PIBF1Q8WXW3 757 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 EMID1Q96A84 441 aaPredicted RBP16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 NEK1Q96PY6 1258 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 PPP1R12CQ9BZL4 782 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 TRPV6Q9H1D0 765 aa16.65■□□□□ 0.26
PPFIA4-212ENST00000600447 SEC63Q9UGP8 760 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms