RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 RBM10P98175 930 aaKnown RBP17.17■□□□□ 0.34
VRK3-218ENST00000600031 ORC2Q13416 577 aaPredicted RBP17.17■□□□□ 0.34
VRK3-218ENST00000600031 GADL1Q6ZQY3 521 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 FCHSD1Q86WN1 690 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 CRYGNQ8WXF5 182 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 FAM13BQ9NYF5 915 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 COL11A1P12107 1806 aaPredicted RBP17.17■□□□□ 0.34
VRK3-218ENST00000600031 LAD1O00515 517 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 NFIBO00712 420 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 OR52Z1P0C646 297 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 MUM1L1Q5H9M0 696 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 PPP4R3AQ6IN85 833 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 DTHD1Q6ZMT9 781 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 SYMPKQ92797 1274 aaKnown RBP17.17■□□□□ 0.34
VRK3-218ENST00000600031 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
VRK3-218ENST00000600031 SPDYE16A6NNV3 312 aaPredicted RBP17.16■□□□□ 0.34
VRK3-218ENST00000600031 CAVIN2O95810 425 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 SREBF1P36956 1147 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 PRPHP41219 470 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 USP11P51784 963 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 ARHGAP4P98171 946 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 TEX2Q8IWB9 1127 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 PROCA1Q8NCQ7 364 aaPredicted RBP17.16■□□□□ 0.34
VRK3-218ENST00000600031 SLC10A4Q96EP9 437 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 MTMR9Q96QG7 549 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 HOXC10Q9NYD6 342 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 RIPK3Q9Y572 518 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 LOC285556D6RIA3 1793 aa17.16■□□□□ 0.34
VRK3-218ENST00000600031 TMEM132BQ14DG7 1078 aa17.15■□□□□ 0.34
VRK3-218ENST00000600031 KIAA1524Q8TCG1 905 aa17.15■□□□□ 0.34
VRK3-218ENST00000600031 DDX25Q9UHL0 483 aaKnown RBP17.15■□□□□ 0.34
VRK3-218ENST00000600031 ZNF214Q9UL59 606 aaPredicted RBP17.15■□□□□ 0.34
VRK3-218ENST00000600031 POLR2DO15514 142 aaKnown RBP17.15■□□□□ 0.34
VRK3-218ENST00000600031 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
VRK3-218ENST00000600031 LONP1P36776 959 aaKnown RBP17.15■□□□□ 0.34
VRK3-218ENST00000600031 MOGSQ13724 837 aa17.15■□□□□ 0.34
VRK3-218ENST00000600031 CALCRLQ16602 461 aa17.15■□□□□ 0.34
VRK3-218ENST00000600031 LONRF3Q496Y0 759 aa17.15■□□□□ 0.34
VRK3-218ENST00000600031 POTEEQ6S8J3 1075 aa17.15■□□□□ 0.34
VRK3-218ENST00000600031 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
VRK3-218ENST00000600031 GBA2Q9HCG7 927 aaPredicted RBP17.15■□□□□ 0.34
VRK3-218ENST00000600031 MYPNQ86TC9 1320 aa17.15■□□□□ 0.34
VRK3-218ENST00000600031 A0A087X0B3 334 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
VRK3-218ENST00000600031 CTAGE5O15320 804 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 GCFC2P16383 781 aaKnown RBP17.14■□□□□ 0.33
VRK3-218ENST00000600031 HOXA7P31268 230 aaPredicted RBP17.14■□□□□ 0.33
VRK3-218ENST00000600031 HSD17B4P51659 736 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 PDILTQ8N807 584 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 TIGD1Q96MW7 591 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 CYP3A7-CYP3A51PA0A087WV96 503 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 UNCXA6NJT0 531 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 CYP3A7P24462 503 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 CDC25AP30304 524 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 GTF2F1P35269 517 aaKnown RBP eCLIP17.14■□□□□ 0.33
VRK3-218ENST00000600031 OAZ1P54368 228 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 ANO6Q4KMQ2 910 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 SNRNP48Q6IEG0 339 aaKnown RBP17.14■□□□□ 0.33
VRK3-218ENST00000600031 ERCC4Q92889 916 aaPredicted RBP17.14■□□□□ 0.33
VRK3-218ENST00000600031 MBOAT7Q96N66 472 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 CBX8Q9HC52 389 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 COL20A1Q9P218 1284 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 PNMA2Q9UL42 364 aa17.14■□□□□ 0.33
VRK3-218ENST00000600031 ITGBL1O95965 494 aaPredicted RBP17.13■□□□□ 0.33
VRK3-218ENST00000600031 FKBP1BP68106 108 aa17.13■□□□□ 0.33
VRK3-218ENST00000600031 GHRHRQ02643 423 aa17.13■□□□□ 0.33
VRK3-218ENST00000600031 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.13■□□□□ 0.33
VRK3-218ENST00000600031 MCF2L2Q86YR7 1114 aa17.13■□□□□ 0.33
VRK3-218ENST00000600031 NAP1L4Q99733 375 aaKnown RBP17.13■□□□□ 0.33
VRK3-218ENST00000600031 AGTPBP1Q9UPW5 1226 aa17.13■□□□□ 0.33
VRK3-218ENST00000600031 PP2D1A8MPX8 630 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 TECP42680 631 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 TXKP42681 527 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 CST9Q5W186 159 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 MOXD1Q6UVY6 613 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 C2orf69Q8N8R5 385 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 HAS1Q92839 578 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 KCNF1Q9H3M0 494 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 RNF146Q9NTX7 359 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 FAM86B1E9PN63 330 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 PEX10O60683 326 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 CYP3A4P08684 503 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 FAM86B2P0C5J1 330 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 CIITAP33076 1130 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 LUZP1Q86V48 1076 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 CNNM3Q8NE01 707 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 GJA10Q969M2 543 aa17.12■□□□□ 0.33
VRK3-218ENST00000600031 RPS6P62753 249 aaKnown RBP17.11■□□□□ 0.33
VRK3-218ENST00000600031 UBXN2AP68543 259 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 PLS1Q14651 629 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 GPAT2Q6NUI2 795 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 CHADLQ6NUI6 762 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 LBX2Q6XYB7 198 aa17.11■□□□□ 0.33
VRK3-218ENST00000600031 FASTKD5Q7L8L6 764 aaKnown RBP17.11■□□□□ 0.33
VRK3-218ENST00000600031 SPC24Q8NBT2 197 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms