RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 AP3B2Q13367 1082 aa16.28■□□□□ 0.2
SYMPK-213ENST00000599460 LRRC41Q15345 812 aa16.28■□□□□ 0.2
SYMPK-213ENST00000599460 ARL6IP4Q66PJ3 421 aaKnown RBP16.28■□□□□ 0.2
SYMPK-213ENST00000599460 CCDC155Q8N6L0 562 aa16.28■□□□□ 0.2
SYMPK-213ENST00000599460 ZMYND15Q9H091 742 aa16.28■□□□□ 0.2
SYMPK-213ENST00000599460 PCDHA6Q9UN73 950 aa16.28■□□□□ 0.2
SYMPK-213ENST00000599460 PCDHA8Q9Y5H6 950 aa16.28■□□□□ 0.2
SYMPK-213ENST00000599460 FLT1P17948 1338 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 A0A087WWV3 80 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 F5H6K3 240 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 KLRC3Q07444 240 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 RAVER2Q9HCJ3 691 aaKnown RBP16.27■□□□□ 0.2
SYMPK-213ENST00000599460 MAN1B1Q9UKM7 699 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 PPP1R7Q15435 360 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 GBP6Q6ZN66 633 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 SGMS1Q86VZ5 419 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 COL23A1Q86Y22 540 aaPredicted RBP16.27■□□□□ 0.2
SYMPK-213ENST00000599460 IFT81Q8WYA0 676 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 ANKFY1Q9P2R3 1169 aa16.27■□□□□ 0.2
SYMPK-213ENST00000599460 DLATP10515 647 aaKnown RBP16.27■□□□□ 0.19
SYMPK-213ENST00000599460 LRRC45Q96CN5 670 aa16.27■□□□□ 0.19
SYMPK-213ENST00000599460 CCDC51Q96ER9 411 aa16.27■□□□□ 0.19
SYMPK-213ENST00000599460 KAZALD1Q96I82 304 aa16.27■□□□□ 0.19
SYMPK-213ENST00000599460 CCDC114Q96M63 670 aa16.27■□□□□ 0.19
SYMPK-213ENST00000599460 OSBPL5Q9H0X9 879 aaPredicted RBP16.27■□□□□ 0.19
SYMPK-213ENST00000599460 METTL14Q9HCE5 456 aaKnown RBP16.27■□□□□ 0.19
SYMPK-213ENST00000599460 GOLGA6L7A0A1B0GV03 622 aa16.27■□□□□ 0.19
SYMPK-213ENST00000599460 GAP43P17677 238 aa16.27■□□□□ 0.19
SYMPK-213ENST00000599460 HACE1Q8IYU2 909 aa16.27■□□□□ 0.19
SYMPK-213ENST00000599460 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.19
SYMPK-213ENST00000599460 TUBB4BP68371 445 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 EXOSC10Q01780 885 aaKnown RBP16.26■□□□□ 0.19
SYMPK-213ENST00000599460 ZNF658Q5TYW1 1059 aaPredicted RBP16.26■□□□□ 0.19
SYMPK-213ENST00000599460 OR8K1Q8NGG5 319 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 SLC7A3Q8WY07 619 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 CCDC127Q96BQ5 260 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 DPEP1P16444 411 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 C11orf57Q6ZUT1 292 aaPredicted RBP16.26■□□□□ 0.19
SYMPK-213ENST00000599460 MICALL2Q8IY33 904 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 ADGRF4Q8IZF3 695 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 CEP170P1Q96L14 293 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 CNOT6LQ96LI5 555 aaKnown RBP16.26■□□□□ 0.19
SYMPK-213ENST00000599460 ADPGKQ9BRR6 497 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 AGTPBP1Q9UPW5 1226 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 FAM170AA1A519 330 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 RNASE9P60153 205 aaKnown RBP16.26■□□□□ 0.19
SYMPK-213ENST00000599460 SPP2Q13103 211 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 GAS2L3Q86XJ1 694 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 POMGNT1Q8WZA1 660 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 HOXC10Q9NYD6 342 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 P4HA1P13674 534 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 ERCC5P28715 1186 aaPredicted RBP16.26■□□□□ 0.19
SYMPK-213ENST00000599460 PPP2R3AQ06190 1150 aa16.26■□□□□ 0.19
SYMPK-213ENST00000599460 TNS2Q63HR2 1409 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 N4BP1O75113 896 aaKnown RBP16.25■□□□□ 0.19
SYMPK-213ENST00000599460 STAT1P42224 750 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 C2orf69Q8N8R5 385 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 PAGE5Q96GU1 130 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 DHTKD1Q96HY7 919 aaPredicted RBP16.25■□□□□ 0.19
SYMPK-213ENST00000599460 PNMA3Q9UL41 463 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
SYMPK-213ENST00000599460 KLRK1P26718 216 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 IFIH1Q9BYX4 1025 aaKnown RBP16.25■□□□□ 0.19
SYMPK-213ENST00000599460 ATP2A1O14983 1001 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 MYL1P05976 194 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 COPB1P53618 953 aaKnown RBP16.25■□□□□ 0.19
SYMPK-213ENST00000599460 SNX16P57768 344 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 TFDP1Q14186 410 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 CDC42EP5Q6NZY7 148 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 RNF169Q8NCN4 708 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 HNRNPDLO14979 420 aaKnown RBP16.25■□□□□ 0.19
SYMPK-213ENST00000599460 PLA2G4BP0C869 781 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 UBL4BQ8N7F7 174 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 TDRD7Q8NHU6 1098 aaKnown RBP16.25■□□□□ 0.19
SYMPK-213ENST00000599460 P2RX5Q93086 422 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 KIF1AQ12756 1690 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 SIGLEC1Q9BZZ2 1709 aa16.25■□□□□ 0.19
SYMPK-213ENST00000599460 TNNC2P02585 160 aa16.24■□□□□ 0.19
SYMPK-213ENST00000599460 CTTNQ14247 550 aaKnown RBP16.24■□□□□ 0.19
SYMPK-213ENST00000599460 PPP2R5AQ15172 486 aa16.24■□□□□ 0.19
SYMPK-213ENST00000599460 STAG2Q8N3U4 1231 aa16.24■□□□□ 0.19
SYMPK-213ENST00000599460 MRFAP1L1Q96HT8 127 aa16.24■□□□□ 0.19
SYMPK-213ENST00000599460 ZFP91Q96JP5 570 aaPredicted RBP16.24■□□□□ 0.19
SYMPK-213ENST00000599460 NR2F2P24468 414 aa16.24■□□□□ 0.19
SYMPK-213ENST00000599460 POLR2FP61218 127 aaKnown RBP16.24■□□□□ 0.19
SYMPK-213ENST00000599460 DCUN1D2Q6PH85 259 aa16.24■□□□□ 0.19
SYMPK-213ENST00000599460 DEFB132Q7Z7B7 95 aa16.24■□□□□ 0.19
SYMPK-213ENST00000599460 SLC17A8Q8NDX2 589 aa16.24■□□□□ 0.19
SYMPK-213ENST00000599460 TMEM260Q9NX78 707 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms