RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 NMIQ13287 307 aaPredicted RBP19.93■□□□□ 0.78
PNKP-210ENST00000597965 TMEM63BQ5T3F8 832 aa19.93■□□□□ 0.78
PNKP-210ENST00000597965 CCDC155Q8N6L0 562 aa19.93■□□□□ 0.78
PNKP-210ENST00000597965 RILPL2Q969X0 211 aa19.93■□□□□ 0.78
PNKP-210ENST00000597965 SCLYQ96I15 445 aa19.93■□□□□ 0.78
PNKP-210ENST00000597965 ASB2Q96Q27 587 aa19.93■□□□□ 0.78
PNKP-210ENST00000597965 SLC9A7Q96T83 725 aa19.93■□□□□ 0.78
PNKP-210ENST00000597965 NOD1Q9Y239 953 aa19.93■□□□□ 0.78
PNKP-210ENST00000597965 GBF1Q92538 1859 aa19.92■□□□□ 0.78
PNKP-210ENST00000597965 PTGS1P23219 599 aa19.92■□□□□ 0.78
PNKP-210ENST00000597965 HAND2P61296 217 aa19.92■□□□□ 0.78
PNKP-210ENST00000597965 NBPF20Q3BBV1 942 aa19.92■□□□□ 0.78
PNKP-210ENST00000597965 TMEM67Q5HYA8 995 aa19.92■□□□□ 0.78
PNKP-210ENST00000597965 MCF2L2Q86YR7 1114 aa19.92■□□□□ 0.78
PNKP-210ENST00000597965 PHOSPHO2Q8TCD6 241 aa19.92■□□□□ 0.78
PNKP-210ENST00000597965 YBX2Q9Y2T7 364 aaKnown RBP19.92■□□□□ 0.78
PNKP-210ENST00000597965 SCN10AQ9Y5Y9 1956 aa19.92■□□□□ 0.78
PNKP-210ENST00000597965 KIF28PB7ZC32 967 aa19.91■□□□□ 0.78
PNKP-210ENST00000597965 CYP2C9P11712 490 aa19.91■□□□□ 0.78
PNKP-210ENST00000597965 AAK1Q2M2I8 961 aa19.91■□□□□ 0.78
PNKP-210ENST00000597965 ZNF589Q86UQ0 364 aaPredicted RBP19.91■□□□□ 0.78
PNKP-210ENST00000597965 ABCB11O95342 1321 aa19.91■□□□□ 0.78
PNKP-210ENST00000597965 HIP1O00291 1037 aa19.9■□□□□ 0.78
PNKP-210ENST00000597965 GTPBP6O43824 516 aaPredicted RBP19.9■□□□□ 0.78
PNKP-210ENST00000597965 PARNO95453 639 aaKnown RBP19.9■□□□□ 0.78
PNKP-210ENST00000597965 ADGRE1Q14246 886 aa19.9■□□□□ 0.78
PNKP-210ENST00000597965 CCDC85BQ15834 202 aaPredicted RBP19.9■□□□□ 0.78
PNKP-210ENST00000597965 USH1GQ495M9 461 aa19.9■□□□□ 0.78
PNKP-210ENST00000597965 DEFB128Q7Z7B8 93 aa19.9■□□□□ 0.78
PNKP-210ENST00000597965 NSUN6Q8TEA1 469 aaKnown RBP19.9■□□□□ 0.78
PNKP-210ENST00000597965 IWS1Q96ST2 819 aa19.9■□□□□ 0.78
PNKP-210ENST00000597965 KAT14Q9H8E8 782 aa19.9■□□□□ 0.78
PNKP-210ENST00000597965 MUC3AQ02505 3323 aa19.9■□□□□ 0.78
PNKP-210ENST00000597965 BAIAP3O94812 1187 aa19.89■□□□□ 0.77
PNKP-210ENST00000597965 IQCF3P0C7M6 154 aa19.89■□□□□ 0.77
PNKP-210ENST00000597965 SDSP20132 328 aa19.89■□□□□ 0.77
PNKP-210ENST00000597965 RABGGTBP53611 331 aa19.89■□□□□ 0.77
PNKP-210ENST00000597965 ASPRV1Q53RT3 343 aa19.89■□□□□ 0.77
PNKP-210ENST00000597965 PNMA1Q8ND90 353 aa19.89■□□□□ 0.77
PNKP-210ENST00000597965 CAGE1Q8TC20 777 aa19.89■□□□□ 0.77
PNKP-210ENST00000597965 CRBNQ96SW2 442 aa19.89■□□□□ 0.77
PNKP-210ENST00000597965 RWDD1Q9H446 243 aaPredicted RBP19.89■□□□□ 0.77
PNKP-210ENST00000597965 STXBP2Q15833 593 aa19.88■□□□□ 0.77
PNKP-210ENST00000597965 CDC37Q16543 378 aaPredicted RBP19.88■□□□□ 0.77
PNKP-210ENST00000597965 TBC1D10CQ8IV04 446 aa19.88■□□□□ 0.77
PNKP-210ENST00000597965 FTOQ9C0B1 505 aaKnown RBP eCLIP19.88■□□□□ 0.77
PNKP-210ENST00000597965 LNPKQ9C0E8 428 aa19.88■□□□□ 0.77
PNKP-210ENST00000597965 MRPL11Q9Y3B7 192 aaKnown RBP19.88■□□□□ 0.77
PNKP-210ENST00000597965 CHD9Q3L8U1 2897 aa19.88■□□□□ 0.77
PNKP-210ENST00000597965 GH1P01241 217 aa19.87■□□□□ 0.77
PNKP-210ENST00000597965 POU3F3P20264 500 aaPredicted RBP19.87■□□□□ 0.77
PNKP-210ENST00000597965 CASTP20810 708 aaKnown RBP19.87■□□□□ 0.77
PNKP-210ENST00000597965 PTGISQ16647 500 aa19.87■□□□□ 0.77
PNKP-210ENST00000597965 SESTD1Q86VW0 696 aa19.87■□□□□ 0.77
PNKP-210ENST00000597965 AFAP1L1Q8TED9 768 aa19.87■□□□□ 0.77
PNKP-210ENST00000597965 ANKS1AQ92625 1134 aa19.87■□□□□ 0.77
PNKP-210ENST00000597965 KATNAL1Q9BW62 490 aa19.87■□□□□ 0.77
PNKP-210ENST00000597965 DIAPH3Q9NSV4 1193 aa19.87■□□□□ 0.77
PNKP-210ENST00000597965 CTNNA3Q9UI47 895 aa19.87■□□□□ 0.77
PNKP-210ENST00000597965 GOLGA8HP0CJ92 632 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 IMMTQ16891 758 aaKnown RBP19.86■□□□□ 0.77
PNKP-210ENST00000597965 CCDC62Q6P9F0 684 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 ADAMTS19Q8TE59 1207 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 ZSCAN10Q96SZ4 725 aaPredicted RBP19.86■□□□□ 0.77
PNKP-210ENST00000597965 UHRF1Q96T88 793 aaPredicted RBP19.86■□□□□ 0.77
PNKP-210ENST00000597965 RMDN3Q96TC7 470 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 ZKSCAN3Q9BRR0 538 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 KRT23Q9C075 422 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 OSBPL3Q9H4L5 887 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 CNNM2Q9H8M5 875 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 TANC1Q9C0D5 1861 aa19.86■□□□□ 0.77
PNKP-210ENST00000597965 NEDD4P46934 1319 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 DHX16O60231 1041 aaKnown RBP19.85■□□□□ 0.77
PNKP-210ENST00000597965 KDM4AO75164 1064 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 CA3P07451 260 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 PARP1P09874 1014 aaKnown RBP19.85■□□□□ 0.77
PNKP-210ENST00000597965 KCNJ6P48051 423 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 DGKDQ16760 1214 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 SEPT14Q6ZU15 432 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 SMC5Q8IY18 1101 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 ADGRF4Q8IZF3 695 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 COPS5Q92905 334 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 VWCEQ96DN2 955 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 UBA5Q9GZZ9 404 aa19.85■□□□□ 0.77
PNKP-210ENST00000597965 MAP3K20Q9NYL2 800 aaKnown RBP19.85■□□□□ 0.77
PNKP-210ENST00000597965 LAMA4Q16363 1823 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 EIF3JO75822 258 aaKnown RBP19.84■□□□□ 0.77
PNKP-210ENST00000597965 MMP3P08254 477 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 MYOGP15173 224 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 CHMP4BP1P59074 171 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 TRAF1Q13077 416 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 ARHGEF16Q5VV41 709 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
PNKP-210ENST00000597965 FBXO11Q86XK2 927 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 MICALL1Q8N3F8 863 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 SYTL5Q8TDW5 730 aaPredicted RBP19.84■□□□□ 0.77
PNKP-210ENST00000597965 AFG1LQ8WV93 481 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 EMID1Q96A84 441 aaPredicted RBP19.84■□□□□ 0.77
PNKP-210ENST00000597965 UBAC1Q9BSL1 405 aa19.84■□□□□ 0.77
PNKP-210ENST00000597965 DSCC1Q9BVC3 393 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms