RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 ICAM1P05362 532 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 KCNA5P22460 613 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 NHLH1Q02575 133 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 LEXMQ3ZCV2 418 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 TTBK2Q6IQ55 1244 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 IFNL3Q8IZI9 196 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 GJD3Q8N144 294 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 RANBP17Q9H2T7 1088 aaKnown RBP12.95□□□□□ -0.34
ZNF548-207ENST00000597400 LMCD1Q9NZU5 365 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 MTMR7Q9Y216 660 aa12.95□□□□□ -0.34
ZNF548-207ENST00000597400 KMT2EQ8IZD2 1858 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 RNF113AO15541 343 aaKnown RBP12.94□□□□□ -0.34
ZNF548-207ENST00000597400 NBNO60934 754 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 HMMRO75330 724 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 GJB5O95377 273 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 EDNRBP24530 442 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 SLC16A2P36021 539 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 KCNJ6P48051 423 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 ERVK-21P61565 698 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 RCSD1Q6JBY9 416 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 GDF6Q6KF10 455 aaPredicted RBP12.94□□□□□ -0.34
ZNF548-207ENST00000597400 RETREG2Q8NC44 543 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 CLEC4DQ8WXI8 215 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 STX8Q9UNK0 236 aa12.94□□□□□ -0.34
ZNF548-207ENST00000597400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.94□□□□□ -0.34
ZNF548-207ENST00000597400 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 CXCL10P02778 98 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 APPP05067 770 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 PTPN11Q06124 597 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-207ENST00000597400 PPARAQ07869 468 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 BFSP2Q13515 415 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 PPP2R5BQ15173 497 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 PTGISQ16647 500 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 WNT8BQ93098 351 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 C17orf80Q9BSJ5 609 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 ZNF287Q9HBT7 754 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
ZNF548-207ENST00000597400 ECHDC1Q9NTX5 307 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 ADD3Q9UEY8 706 aaKnown RBP12.93□□□□□ -0.34
ZNF548-207ENST00000597400 TECTAO75443 2155 aa12.93□□□□□ -0.34
ZNF548-207ENST00000597400 KIAA1671Q9BY89 1806 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 PTPDC1A2A3K4 754 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 PATL2C9JE40 543 aaKnown RBP12.92□□□□□ -0.34
ZNF548-207ENST00000597400 GNAT2P19087 354 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 CALML3P27482 149 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 SSTR3P32745 418 aaPredicted RBP12.92□□□□□ -0.34
ZNF548-207ENST00000597400 NOVP48745 357 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 CHMP4BP1P59074 171 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 RBL2Q08999 1139 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 MBTPS1Q14703 1052 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 LRRFIP1Q32MZ4 808 aaKnown RBP12.92□□□□□ -0.34
ZNF548-207ENST00000597400 PTCRAQ6ISU1 281 aaPredicted RBP12.92□□□□□ -0.34
ZNF548-207ENST00000597400 FAM117BQ6P1L5 589 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 LRRC8DQ7L1W4 858 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 AFAP1L1Q8TED9 768 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 KAT2BQ92831 832 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 FBXL18Q96ME1 805 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 UIMC1Q96RL1 719 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 TGS1Q96RS0 853 aaKnown RBP12.92□□□□□ -0.34
ZNF548-207ENST00000597400 ZBED2Q9BTP6 218 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 LRRCC1Q9C099 1032 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 DOCK5Q9H7D0 1870 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 DMDP11532 3685 aa12.92□□□□□ -0.34
ZNF548-207ENST00000597400 FRMPD2Q68DX3 1309 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-207ENST00000597400 LOC102724159A0A0B4J2E5 919 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 GRXCR2A6NFK2 248 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 H3BQ06 376 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-207ENST00000597400 SELPP16109 830 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 RPS6P62753 249 aaKnown RBP12.91□□□□□ -0.34
ZNF548-207ENST00000597400 CTDSPL2Q05D32 466 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 PDE4BQ07343 736 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 MKRN4PQ13434 485 aaPredicted RBP12.91□□□□□ -0.34
ZNF548-207ENST00000597400 PWP2Q15269 919 aaKnown RBP12.91□□□□□ -0.34
ZNF548-207ENST00000597400 CCDC96Q2M329 555 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 CNKSR3Q6P9H4 555 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 BTNL9Q6UXG8 535 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 CAGE1Q8TC20 777 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 NEK9Q8TD19 979 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 SCFD2Q8WU76 684 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 RAD9AQ99638 391 aa12.91□□□□□ -0.34
ZNF548-207ENST00000597400 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.34
ZNF548-207ENST00000597400 MMP3P08254 477 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 TXNP10599 105 aaKnown RBP12.9□□□□□ -0.34
ZNF548-207ENST00000597400 CKBP12277 381 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 PDE4DQ08499 809 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 TRIM71Q2Q1W2 868 aaKnown RBP12.9□□□□□ -0.34
ZNF548-207ENST00000597400 SYDE2Q5VT97 1194 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 CCDC62Q6P9F0 684 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.9□□□□□ -0.34
ZNF548-207ENST00000597400 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 AFG1LQ8WV93 481 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 PHOX2BQ99453 314 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 NAPBQ9H115 298 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
ZNF548-207ENST00000597400 VPS13AQ96RL7 3174 aa12.89□□□□□ -0.35
ZNF548-207ENST00000597400 RAD50Q92878 1312 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms