RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 ATP2B1P20020 1258 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 GCLCP48506 637 aaPredicted RBP13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 TRAPPC10P48553 1259 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 UBXN2AP68543 259 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 PLS1Q14651 629 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 NONOQ15233 471 aaKnown RBP eCLIP13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 SF3A1Q15459 793 aaKnown RBP13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 FAM110CQ1W6H9 321 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 MCTP2Q6DN12 878 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 RIOX2Q8IUF8 465 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 SAMD3Q8N6K7 520 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 PGBD1Q96JS3 809 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 PAGR1Q9BTK6 254 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 TEX13BQ9BXU2 312 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 FTOQ9C0B1 505 aaKnown RBP eCLIP13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 SCAND2PQ9GZW5 306 aaPredicted RBP13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 POLR3EQ9NVU0 708 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 RABGAP1Q9Y3P9 1069 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 MGAMO43451 1857 aa13.08□□□□□ -0.32
SH2D3A-206ENST00000597254 NFIBO00712 420 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 EDIL3O43854 480 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 ADCY3O60266 1144 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 PRPF40AO75400 957 aaKnown RBP13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 SLC34A2O95436 690 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 FOSP01100 380 aaPredicted RBP13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 HOXA13P31271 388 aaPredicted RBP13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 NASPP49321 788 aaPredicted RBP13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 FLT3LGP49771 235 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 HSD17B4P51659 736 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 GHRHRQ02643 423 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 AP3B2Q13367 1082 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 NBR1Q14596 966 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 MTFR1Q15390 333 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 ZNF174Q15697 407 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 CSPP1Q1MSJ5 1256 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 INF2Q27J81 1249 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 Q3C1V9 767 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 TTC38Q5R3I4 469 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 TMEM87AQ8NBN3 555 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 TBCKQ8TEA7 893 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 GTF3C2Q8WUA4 911 aaPredicted RBP13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 LEO1Q8WVC0 666 aaPredicted RBP13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 SPATA32Q96LK8 384 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 SPATC1LQ9H0A9 340 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 HOMER2Q9NSB8 354 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 RNF146Q9NTX7 359 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 LMBRD1Q9NUN5 540 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 MAP3K20Q9NYL2 800 aaKnown RBP13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 GABRQQ9UN88 632 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 PCDHB6Q9Y5E3 794 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 CENPFP49454 3210 aa13.07□□□□□ -0.32
SH2D3A-206ENST00000597254 WNT7AO00755 349 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 YEATS4O95619 227 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 SLC39A14Q15043 492 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 STK38Q15208 465 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 PTPAQ15257 358 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 FCHSD1Q86WN1 690 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 LINC00301Q8NCQ3 95 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 CHST13Q8NET6 341 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 MOV10L1Q9BXT6 1211 aaKnown RBP13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 ANO3Q9BYT9 981 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 MAF1Q9H063 256 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 RNF208Q9H0X6 261 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 TXNRD2Q9NNW7 524 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 DOCK3Q8IZD9 2030 aa13.06□□□□□ -0.32
SH2D3A-206ENST00000597254 A0A0G2JMZ2 1700 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 SPDYE3A6NKU9 549 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 DDX11L8A8MPP1 907 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 SLC25A27O95847 323 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 CCL5P13501 91 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 USP11P51784 963 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 IRF5Q13568 498 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 BAATQ14032 418 aaPredicted RBP13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 RNF207Q6ZRF8 634 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 NEK8Q86SG6 692 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 SYTL5Q8TDW5 730 aaPredicted RBP13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 ACAD9Q9H845 621 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 CEP131Q9UPN4 1083 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 ELP1O95163 1332 aa13.05□□□□□ -0.32
SH2D3A-206ENST00000597254 SPTLC2O15270 562 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 PPP6R2O75170 966 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 GJB1P08034 283 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 ELNP15502 786 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 RPS6P62753 249 aaKnown RBP13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 ERVK-9P63128 1117 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 ERVK-24P63145 666 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 LETM2Q2VYF4 491 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 NSMFQ6X4W1 530 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 NCAPG2Q86XI2 1143 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 GPRC5AQ8NFJ5 357 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 PXYLP1Q8TE99 480 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 TAAR1Q96RJ0 339 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 COL20A1Q9P218 1284 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 FBXO40Q9UH90 709 aa13.04□□□□□ -0.32
SH2D3A-206ENST00000597254 CEP290O15078 2479 aa13.03□□□□□ -0.32
SH2D3A-206ENST00000597254 CCNT1O60563 726 aaKnown RBP13.03□□□□□ -0.32
SH2D3A-206ENST00000597254 GADD45BO75293 160 aaPredicted RBP13.03□□□□□ -0.32
SH2D3A-206ENST00000597254 BMP15O95972 392 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms