RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 CXCL17Q6UXB2 119 aa13.55□□□□□ -0.24
SYMPK-207ENST00000596824 HOMER1Q86YM7 354 aa13.55□□□□□ -0.24
SYMPK-207ENST00000596824 NSUN6Q8TEA1 469 aaKnown RBP13.55□□□□□ -0.24
SYMPK-207ENST00000596824 SCFD2Q8WU76 684 aa13.55□□□□□ -0.24
SYMPK-207ENST00000596824 TMEM87BQ96K49 555 aa13.55□□□□□ -0.24
SYMPK-207ENST00000596824 MAP3K14Q99558 947 aa13.55□□□□□ -0.24
SYMPK-207ENST00000596824 MYL10Q9BUA6 226 aa13.55□□□□□ -0.24
SYMPK-207ENST00000596824 PCDHA1Q9Y5I3 950 aa13.55□□□□□ -0.24
SYMPK-207ENST00000596824 LAMA3Q16787 3333 aa13.55□□□□□ -0.24
SYMPK-207ENST00000596824 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 NKRFO15226 690 aaKnown RBP eCLIP13.54□□□□□ -0.24
SYMPK-207ENST00000596824 ZEB2O60315 1214 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 CFBP00751 764 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 PPP2R5BQ15173 497 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 FAM126BQ8IXS8 530 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 SLC43A3Q8NBI5 491 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 VTI1AQ96AJ9 217 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 IWS1Q96ST2 819 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 RMDN3Q96TC7 470 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 TMEM39AQ9NV64 488 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 TBX21Q9UL17 535 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 WDR81Q562E7 1941 aa13.54□□□□□ -0.24
SYMPK-207ENST00000596824 PTPRSQ13332 1948 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 PNMA6FA0A0J9YX94 578 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 ARIH2O95376 493 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 EIF2AK2P19525 551 aaKnown RBP13.53□□□□□ -0.24
SYMPK-207ENST00000596824 LIFRP42702 1097 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 RNF20Q5VTR2 975 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 TMTC2Q8N394 836 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 SAMD3Q8N6K7 520 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 OR6J1Q8NGC5 347 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 CTCFLQ8NI51 663 aaPredicted RBP13.53□□□□□ -0.24
SYMPK-207ENST00000596824 COPS5Q92905 334 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 SPZ1Q9BXG8 430 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 PXMP2Q9NR77 195 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 MAP3K20Q9NYL2 800 aaKnown RBP13.53□□□□□ -0.24
SYMPK-207ENST00000596824 GRIN2DO15399 1336 aa13.53□□□□□ -0.24
SYMPK-207ENST00000596824 CCDC69A6NI79 296 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 CD4P01730 458 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 TXNP10599 105 aaKnown RBP13.52□□□□□ -0.25
SYMPK-207ENST00000596824 RAG1P15918 1043 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 HOXA13P31271 388 aaPredicted RBP13.52□□□□□ -0.25
SYMPK-207ENST00000596824 KIF5BP33176 963 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 CPT1AP50416 773 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 PSMC6P62333 389 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 TRAF1Q13077 416 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 ITGA7Q13683 1181 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 TTLL4Q14679 1199 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 SHHQ15465 462 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 STXBP2Q15833 593 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 C9orf50Q5SZB4 431 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 ARHGEF16Q5VV41 709 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 CCDC62Q6P9F0 684 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 NFXL1Q6ZNB6 911 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 LRRC2Q9BYS8 371 aa13.52□□□□□ -0.25
SYMPK-207ENST00000596824 TLR3O15455 904 aaKnown RBP13.51□□□□□ -0.25
SYMPK-207ENST00000596824 PLEKHA8P1O95397 391 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 TIMP1P01033 207 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 NR3C2P08235 984 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 CALM1P0DP23 149 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 CALM2P0DP24 149 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 CALM3P0DP25 149 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 RXRAP19793 462 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 SMARCA1P28370 1054 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 EPHB4P54760 987 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 PURAQ00577 322 aaKnown RBP13.51□□□□□ -0.25
SYMPK-207ENST00000596824 TSGA10IPQ3SY00 556 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 GPR153Q6NV75 609 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 SEPT14Q6ZU15 432 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 SGMS1Q86VZ5 419 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 PIBF1Q8WXW3 757 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 PDCD2LQ9BRP1 358 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 SEZ6LQ9BYH1 1024 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 POLR3EQ9NVU0 708 aa13.51□□□□□ -0.25
SYMPK-207ENST00000596824 FRMPD4Q14CM0 1322 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 A6NJR5 290 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 GCOM1H8Y6P7 765 aaPredicted RBP13.5□□□□□ -0.25
SYMPK-207ENST00000596824 EIF3JO75822 258 aaKnown RBP13.5□□□□□ -0.25
SYMPK-207ENST00000596824 NEFLP07196 543 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 MYL3P08590 195 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 POLR2MP0CAP2 368 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 FPGSQ05932 587 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 PGM5Q15124 567 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 ADCK5Q3MIX3 580 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 RAB11FIP4Q86YS3 637 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 SRBD1Q8N5C6 995 aaKnown RBP13.5□□□□□ -0.25
SYMPK-207ENST00000596824 IL31RAQ8NI17 732 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 RRP36Q96EU6 259 aaKnown RBP13.5□□□□□ -0.25
SYMPK-207ENST00000596824 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 LZTS2Q9BRK4 669 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 SLC12A7Q9Y666 1083 aa13.5□□□□□ -0.25
SYMPK-207ENST00000596824 TET1Q8NFU7 2136 aa13.49□□□□□ -0.25
SYMPK-207ENST00000596824 B4GALT4O60513 344 aa13.49□□□□□ -0.25
SYMPK-207ENST00000596824 RGS20O76081 388 aa13.49□□□□□ -0.25
SYMPK-207ENST00000596824 GH1P01241 217 aa13.49□□□□□ -0.25
SYMPK-207ENST00000596824 GNAQP50148 359 aa13.49□□□□□ -0.25
SYMPK-207ENST00000596824 EXOSC10Q01780 885 aaKnown RBP13.49□□□□□ -0.25
SYMPK-207ENST00000596824 ARHGAP1Q07960 439 aa13.49□□□□□ -0.25
SYMPK-207ENST00000596824 LY6KQ17RY6 165 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms