RNA–Protein interactions for RNA: ENST00000596319.1

SAMD4B-205, Transcript of sterile alpha motif domain containing 4B, humanhuman

TSL 2

Gene SAMD4B, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-205ENST00000596319 CDX2Q99626 313 aaPredicted RBP12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.18□□□□□ -0.465e-9■□□□□ 10.6
SAMD4B-205ENST00000596319 ZKSCAN3Q9BRR0 538 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 WDR11Q9BZH6 1224 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 TTYH1Q9H313 450 aaPredicted RBP12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 ZSWIM5Q9P217 1185 aa12.18□□□□□ -0.46
SAMD4B-205ENST00000596319 LAMA4Q16363 1823 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 B4DLN1 442 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 DLL1O00548 723 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 NKRFO15226 690 aaKnown RBP eCLIP12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 GOLGA8HP0CJ92 632 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 CALML3P27482 149 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 NEK4P51957 841 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 MRPL12P52815 198 aaKnown RBP12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 ASPRV1Q53RT3 343 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 RASIP1Q5U651 963 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 C16orf59Q7L2K0 433 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 ENAHQ8N8S7 591 aaPredicted RBP12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 INTS4Q96HW7 963 aaKnown RBP12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 KRT23Q9C075 422 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 UBA5Q9GZZ9 404 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 KAT14Q9H8E8 782 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 CNNM2Q9H8M5 875 aa12.17□□□□□ -0.46
SAMD4B-205ENST00000596319 CSF2RAP15509 400 aa12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 PDE4DQ08499 809 aa12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 CUL4AQ13619 759 aa12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 PSRC1Q6PGN9 363 aaPredicted RBP12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 ADGRF4Q8IZF3 695 aa12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 PPP1R12CQ9BZL4 782 aa12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 LSG1Q9H089 658 aaKnown RBP12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 POLR3EQ9NVU0 708 aa12.16□□□□□ -0.46
SAMD4B-205ENST00000596319 TNKSO95271 1327 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 ABCB11O95342 1321 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 B4GALT4O60513 344 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 PARP1P09874 1014 aaKnown RBP12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 CYP2C18P33260 490 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 CPT1AP50416 773 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 PSMC6P62333 389 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 PURAQ00577 322 aaKnown RBP12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 CDC37Q16543 378 aaPredicted RBP12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 USH1GQ495M9 461 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 ZNF365Q70YC5 407 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 MCF2L2Q86YR7 1114 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 UBAC1Q9BSL1 405 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 NOC4LQ9BVI4 516 aaKnown RBP12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 IL25Q9H293 177 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 CPVLQ9H3G5 476 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 HIPK3Q9H422 1215 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 IL23AQ9NPF7 189 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
SAMD4B-205ENST00000596319 SCN10AQ9Y5Y9 1956 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 A6NJR5 290 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 KPNA6O60684 536 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 SUPT20HL2P0C7V6 817 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 ACRP10323 421 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 DNAJB2P25686 324 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 SEC23AQ15436 765 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 QRICH1Q2TAL8 776 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 BRDTQ58F21 947 aaPredicted RBP12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 HERVK_113Q902F9 699 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 TBC1D5Q92609 795 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 TMX3Q96JJ7 454 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 TRPV6Q9H1D0 765 aa12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 ALDH8A1Q9H2A2 487 aaPredicted RBP12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 MRPL11Q9Y3B7 192 aaKnown RBP12.14□□□□□ -0.47
SAMD4B-205ENST00000596319 BAG4O95429 457 aaKnown RBP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 TXNP10599 105 aaKnown RBP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 TTLL4Q14679 1199 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 IFIT1BQ5T764 474 aaKnown RBP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 CCDC62Q6P9F0 684 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 FBXO11Q86XK2 927 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 MAFAQ8NHW3 353 aaPredicted RBP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 SYTL5Q8TDW5 730 aaPredicted RBP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 NSUN6Q8TEA1 469 aaKnown RBP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 MYLIPQ8WY64 445 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 KCNB2Q92953 911 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 TIFAQ96CG3 184 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 TAAR1Q96RJ0 339 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 IWS1Q96ST2 819 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 MTG1Q9BT17 334 aaPredicted RBP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 ZNF576Q9H609 170 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 JMJD4Q9H9V9 463 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 GPHNQ9NQX3 736 aaPredicted RBP12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 MYH6P13533 1939 aa12.13□□□□□ -0.47
SAMD4B-205ENST00000596319 UMODL1Q5DID0 1318 aa12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 FGBP02675 491 aa12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 MYL3P08590 195 aa12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 CCL23P55773 120 aa12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 GHRHRQ02643 423 aa12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 PTPN11Q06124 597 aaPredicted RBP12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 NFRKBQ6P4R8 1299 aa12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 RPUSD2Q8IZ73 545 aaKnown RBP12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 STAG2Q8N3U4 1231 aa12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 COPS5Q92905 334 aa12.12□□□□□ -0.47
SAMD4B-205ENST00000596319 PBX4Q9BYU1 374 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms