RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 DNAJB2P25686 324 aa19.86■□□□□ 0.77
CCDC9-202ENST00000595659 PBX2P40425 430 aa19.86■□□□□ 0.77
CCDC9-202ENST00000595659 MRPL12P52815 198 aaKnown RBP19.86■□□□□ 0.77
CCDC9-202ENST00000595659 TRDNQ13061 729 aa19.86■□□□□ 0.77
CCDC9-202ENST00000595659 FAM47CQ5HY64 1035 aa19.86■□□□□ 0.77
CCDC9-202ENST00000595659 CHST3Q7LGC8 479 aa19.86■□□□□ 0.77
CCDC9-202ENST00000595659 RUFY2Q8WXA3 655 aa19.86■□□□□ 0.77
CCDC9-202ENST00000595659 MTG1Q9BT17 334 aaPredicted RBP19.86■□□□□ 0.77
CCDC9-202ENST00000595659 SENP2Q9HC62 589 aa19.86■□□□□ 0.77
CCDC9-202ENST00000595659 IL23AQ9NPF7 189 aa19.86■□□□□ 0.77
CCDC9-202ENST00000595659 MRPL11Q9Y3B7 192 aaKnown RBP19.86■□□□□ 0.77
CCDC9-202ENST00000595659 RAD50Q92878 1312 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 LCTP09848 1927 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 KLRF2D3W0D1 207 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 CFBP00751 764 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 LY6KQ17RY6 165 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 MCF2L2Q86YR7 1114 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 SCLYQ96I15 445 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 RMDN3Q96TC7 470 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 WNT8AQ9H1J5 351 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 CXXC1Q9P0U4 656 aaPredicted RBP19.85■□□□□ 0.77
CCDC9-202ENST00000595659 MAD2L2Q9UI95 211 aa19.85■□□□□ 0.77
CCDC9-202ENST00000595659 U3KPZ7 1027 aaPredicted RBP19.85■□□□□ 0.77
CCDC9-202ENST00000595659 IFIT3O14879 490 aaKnown RBP19.84■□□□□ 0.77
CCDC9-202ENST00000595659 NKRFO15226 690 aaKnown RBP eCLIP19.84■□□□□ 0.77
CCDC9-202ENST00000595659 PPP1R11O60927 126 aaPredicted RBP19.84■□□□□ 0.77
CCDC9-202ENST00000595659 EIF2AK2P19525 551 aaKnown RBP19.84■□□□□ 0.77
CCDC9-202ENST00000595659 TTLL4Q14679 1199 aa19.84■□□□□ 0.77
CCDC9-202ENST00000595659 GRIN2CQ14957 1233 aa19.84■□□□□ 0.77
CCDC9-202ENST00000595659 NBPF20Q3BBV1 942 aa19.84■□□□□ 0.77
CCDC9-202ENST00000595659 BRDTQ58F21 947 aaPredicted RBP19.84■□□□□ 0.77
CCDC9-202ENST00000595659 PSRC1Q6PGN9 363 aaPredicted RBP19.84■□□□□ 0.77
CCDC9-202ENST00000595659 OTOP2Q7RTS6 562 aa19.84■□□□□ 0.77
CCDC9-202ENST00000595659 NSUN6Q8TEA1 469 aaKnown RBP19.84■□□□□ 0.77
CCDC9-202ENST00000595659 TIFAQ96CG3 184 aa19.84■□□□□ 0.77
CCDC9-202ENST00000595659 PALM3A6NDB9 673 aaPredicted RBP19.83■□□□□ 0.77
CCDC9-202ENST00000595659 A6NJR5 290 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 FGBP02675 491 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 SLC35G1Q2M3R5 365 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 RASIP1Q5U651 963 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 ARHGEF16Q5VV41 709 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 CCDC62Q6P9F0 684 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 STOX1Q6ZVD7 989 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 HOMER1Q86YM7 354 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 MAFAQ8NHW3 353 aaPredicted RBP19.83■□□□□ 0.77
CCDC9-202ENST00000595659 AFG1LQ8WV93 481 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 AMNQ9BXJ7 453 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 SEZ6LQ9BYH1 1024 aa19.83■□□□□ 0.77
CCDC9-202ENST00000595659 E7EWF7 191 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 OPLAHO14841 1288 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 SGSM2O43147 1006 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 FOSL2P15408 326 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 STXBP2Q15833 593 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 RALYLQ86SE5 291 aaKnown RBP19.82■□□□□ 0.76
CCDC9-202ENST00000595659 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.82■□□□□ 0.76
CCDC9-202ENST00000595659 HERVK_113Q902F9 699 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 PBX4Q9BYU1 374 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 ZNF576Q9H609 170 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 PCDHA1Q9Y5I3 950 aa19.82■□□□□ 0.76
CCDC9-202ENST00000595659 HOXA13P31271 388 aaPredicted RBP19.81■□□□□ 0.76
CCDC9-202ENST00000595659 GRM4Q14833 912 aa19.81■□□□□ 0.76
CCDC9-202ENST00000595659 PIBF1Q8WXW3 757 aa19.81■□□□□ 0.76
CCDC9-202ENST00000595659 MTMR8Q96EF0 704 aa19.81■□□□□ 0.76
CCDC9-202ENST00000595659 PIGSQ96S52 555 aa19.81■□□□□ 0.76
CCDC9-202ENST00000595659 A0A0C4DFX4 3053 aa19.81■□□□□ 0.76
CCDC9-202ENST00000595659 ERICH2A1L162 156 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 ZBTB5O15062 677 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 SORBS3O60504 671 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 KPNA6O60684 536 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 NR3C2P08235 984 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 SUPT20HL2P0C7V6 817 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 MYCLP12524 364 aaPredicted RBP19.8■□□□□ 0.76
CCDC9-202ENST00000595659 ARHGAP1Q07960 439 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 WTAPQ15007 396 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 TMEM67Q5HYA8 995 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 DEFB128Q7Z7B8 93 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 NCOA7Q8NI08 942 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 VWCEQ96DN2 955 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 ZFP91Q96JP5 570 aaPredicted RBP19.8■□□□□ 0.76
CCDC9-202ENST00000595659 IWS1Q96ST2 819 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 PXMP2Q9NR77 195 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 LAMA4Q16363 1823 aa19.8■□□□□ 0.76
CCDC9-202ENST00000595659 TMEM265A0A087WTH1 108 aa19.79■□□□□ 0.76
CCDC9-202ENST00000595659 GH1P01241 217 aa19.79■□□□□ 0.76
CCDC9-202ENST00000595659 MMP3P08254 477 aa19.79■□□□□ 0.76
CCDC9-202ENST00000595659 HSD17B4P51659 736 aa19.79■□□□□ 0.76
CCDC9-202ENST00000595659 MAP4K1Q92918 833 aa19.79■□□□□ 0.76
CCDC9-202ENST00000595659 DDX41Q9UJV9 622 aaKnown RBP19.79■□□□□ 0.76
CCDC9-202ENST00000595659 RBM8AQ9Y5S9 174 aaKnown RBP19.79■□□□□ 0.76
CCDC9-202ENST00000595659 MRVI1Q9Y6F6 885 aa19.79■□□□□ 0.76
CCDC9-202ENST00000595659 ZBBXA8MT70 800 aa19.78■□□□□ 0.76
CCDC9-202ENST00000595659 CYTH3O43739 400 aa19.78■□□□□ 0.76
CCDC9-202ENST00000595659 EIF3JO75822 258 aaKnown RBP19.78■□□□□ 0.76
CCDC9-202ENST00000595659 RABGGTBP53611 331 aa19.78■□□□□ 0.76
CCDC9-202ENST00000595659 ANTXR2P58335 489 aa19.78■□□□□ 0.76
CCDC9-202ENST00000595659 NFRKBQ6P4R8 1299 aa19.78■□□□□ 0.76
CCDC9-202ENST00000595659 RPUSD2Q8IZ73 545 aaKnown RBP19.78■□□□□ 0.76
CCDC9-202ENST00000595659 MAF1Q9H063 256 aa19.78■□□□□ 0.76
CCDC9-202ENST00000595659 MTIF3Q9H2K0 278 aaKnown RBP19.78■□□□□ 0.76
CCDC9-202ENST00000595659 NKX2-4Q9H2Z4 354 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms