RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 C16orf86Q6ZW13 317 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 DYMQ7RTS9 669 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 ZNF804AQ7Z570 1209 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 NEDD1Q8NHV4 660 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 IPO4Q8TEX9 1081 aaKnown RBP18.36■□□□□ 0.53
LIG1-206ENST00000594067 ARHGEF1Q92888 912 aaKnown RBP18.36■□□□□ 0.53
LIG1-206ENST00000594067 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 CCDC42Q96M95 316 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 GDAP1L1Q96MZ0 367 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 ZNF287Q9HBT7 754 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 JADE2Q9NQC1 790 aa18.36■□□□□ 0.53
LIG1-206ENST00000594067 USP17L5A8MUK1 530 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 EPHB6O15197 1021 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 MAGEA9P43362 315 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 CKAP4Q07065 602 aaKnown RBP18.35■□□□□ 0.53
LIG1-206ENST00000594067 KIF5AQ12840 1032 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 GRB10Q13322 594 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 GRAPQ13588 217 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 SV2BQ7L1I2 683 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 REXO1Q8N1G1 1221 aaKnown RBP18.35■□□□□ 0.53
LIG1-206ENST00000594067 GRAPLQ8TC17 118 aaPredicted RBP18.35■□□□□ 0.53
LIG1-206ENST00000594067 AFAP1L1Q8TED9 768 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 MYMKA6NI61 221 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 ERCC3P19447 782 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 MCM3P25205 808 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 VAV2P52735 878 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 CCDC96Q2M329 555 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 MAP9Q49MG5 647 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 RC3H1Q5TC82 1133 aaKnown RBP18.35■□□□□ 0.53
LIG1-206ENST00000594067 GSPT2Q8IYD1 628 aaKnown RBP18.35■□□□□ 0.53
LIG1-206ENST00000594067 COG1Q8WTW3 980 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 SECISBP2LQ93073 1101 aaKnown RBP18.35■□□□□ 0.53
LIG1-206ENST00000594067 FAM207AQ9NSI2 230 aaPredicted RBP18.35■□□□□ 0.53
LIG1-206ENST00000594067 BLOC1S4Q9NUP1 217 aa18.35■□□□□ 0.53
LIG1-206ENST00000594067 RTCBQ9Y3I0 505 aaKnown RBP18.35■□□□□ 0.53
LIG1-206ENST00000594067 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
LIG1-206ENST00000594067 A0A1W2PQJ5 194 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 TARSL2A2RTX5 802 aaKnown RBP18.34■□□□□ 0.53
LIG1-206ENST00000594067 PPP1R2P41236 205 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 SPA17Q15506 151 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 RIN2Q8WYP3 895 aaPredicted RBP18.34■□□□□ 0.53
LIG1-206ENST00000594067 PURBQ96QR8 312 aaKnown RBP18.34■□□□□ 0.53
LIG1-206ENST00000594067 C2orf54Q08AI8 447 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 VWA3BQ502W6 1294 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 CENPPQ6IPU0 288 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 C2CD5Q86YS7 1000 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 COA7Q96BR5 231 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 PNMA5Q96PV4 448 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 HINFPQ9BQA5 517 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 ARHGAP20Q9P2F6 1191 aa18.34■□□□□ 0.53
LIG1-206ENST00000594067 PPFIA4O75335 1185 aa18.33■□□□□ 0.53
LIG1-206ENST00000594067 CORO7P57737 925 aa18.33■□□□□ 0.53
LIG1-206ENST00000594067 CALCRLQ16602 461 aa18.33■□□□□ 0.53
LIG1-206ENST00000594067 FIGNQ5HY92 759 aa18.33■□□□□ 0.53
LIG1-206ENST00000594067 GOLGA6L1Q8N7Z2 621 aa18.33■□□□□ 0.53
LIG1-206ENST00000594067 DRC1Q96MC2 740 aa18.33■□□□□ 0.53
LIG1-206ENST00000594067 PLEKHA4Q9H4M7 779 aa18.33■□□□□ 0.53
LIG1-206ENST00000594067 ANO9A1A5B4 782 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 SLC37A4O43826 429 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 TDP2O95551 362 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 MYBL2P10244 700 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 CDK5RAP3Q96JB5 506 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 RPGRIP1Q96KN7 1286 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 NDST4Q9H3R1 872 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 MMRN2Q9H8L6 949 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 MLXIPQ9HAP2 919 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 NAV1Q8NEY1 1877 aa18.33■□□□□ 0.52
LIG1-206ENST00000594067 CDK17Q00537 523 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 MTMR9Q96QG7 549 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 SIK3Q9Y2K2 1263 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 CAPN6Q9Y6Q1 641 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 POTEMA6NI47 508 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 ANKRD65E5RJM6 399 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 GPSM2P81274 684 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 ATP2B2Q01814 1243 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 COBLL1Q53SF7 1204 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 UNC13DQ70J99 1090 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 LARP4BQ92615 738 aaKnown RBP18.32■□□□□ 0.52
LIG1-206ENST00000594067 NUDT12Q9BQG2 462 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
LIG1-206ENST00000594067 CD209Q9NNX6 404 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
LIG1-206ENST00000594067 PLAGL2Q9UPG8 496 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 PCDHA13Q9Y5I0 950 aa18.32■□□□□ 0.52
LIG1-206ENST00000594067 MYH1P12882 1939 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 GPR75-ASB3A0A0A6YYF3 556 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 AGPSO00116 658 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 GGCXP38435 758 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 EIF4A3P38919 411 aaKnown RBP18.31■□□□□ 0.52
LIG1-206ENST00000594067 CCNI2Q6ZMN8 369 aaPredicted RBP18.31■□□□□ 0.52
LIG1-206ENST00000594067 TSGA10Q9BZW7 698 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
LIG1-206ENST00000594067 MOCS3O95396 460 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 KIF11P52732 1056 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 LRRC41Q15345 812 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 PACS2Q86VP3 889 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 DEF6Q9H4E7 631 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 COL24A1Q17RW2 1714 aa18.31■□□□□ 0.52
LIG1-206ENST00000594067 EDIL3O43854 480 aa18.3■□□□□ 0.52
LIG1-206ENST00000594067 USO1O60763 962 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms