RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 PTGISQ16647 500 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 LRRFIP1Q32MZ4 808 aaKnown RBP10.91□□□□□ -0.66
SRRM1-221ENST00000593639 BRDTQ58F21 947 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-221ENST00000593639 GDF6Q6KF10 455 aaPredicted RBP10.91□□□□□ -0.66
SRRM1-221ENST00000593639 SLC30A10Q6XR72 485 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 LRRC8DQ7L1W4 858 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 IFNL3Q8IZI9 196 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 KBTBD3Q8NAB2 608 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 CAGE1Q8TC20 777 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 AFAP1L1Q8TED9 768 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 DHX38Q92620 1227 aaKnown RBP10.91□□□□□ -0.66
SRRM1-221ENST00000593639 ANKS1AQ92625 1134 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 RANBP17Q9H2T7 1088 aaKnown RBP10.91□□□□□ -0.66
SRRM1-221ENST00000593639 IL17RBQ9NRM6 502 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 STX8Q9UNK0 236 aa10.91□□□□□ -0.66
SRRM1-221ENST00000593639 TRIOO75962 3097 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 RAD50Q92878 1312 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 LOC102724159A0A0B4J2E5 919 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 POTEB3A0JP26 581 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 PTPDC1A2A3K4 754 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 PATL2C9JE40 543 aaKnown RBP10.9□□□□□ -0.66
SRRM1-221ENST00000593639 H3BQ06 376 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-221ENST00000593639 NKRFO15226 690 aaKnown RBP eCLIP10.9□□□□□ -0.66
SRRM1-221ENST00000593639 RNF113AO15541 343 aaKnown RBP10.9□□□□□ -0.66
SRRM1-221ENST00000593639 DCXO43602 365 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 SMARCA5O60264 1052 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-221ENST00000593639 NMT2O60551 498 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 ARIH2O95376 493 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 CXCL10P02778 98 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 SELPP16109 830 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 GNAT2P19087 354 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 EDNRBP24530 442 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 CALML3P27482 149 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 SLC16A2P36021 539 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 PDE4BQ07343 736 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 PWP2Q15269 919 aaKnown RBP10.9□□□□□ -0.66
SRRM1-221ENST00000593639 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 TTBK2Q6IQ55 1244 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 FAM117BQ6P1L5 589 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 CNKSR3Q6P9H4 555 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 POTEBQ6S5H4 581 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 NEK9Q8TD19 979 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 CLEC4DQ8WXI8 215 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 C17orf80Q9BSJ5 609 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 ZBTB40Q9NUA8 1239 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 RNF216Q9NWF9 866 aaPredicted RBP10.9□□□□□ -0.66
SRRM1-221ENST00000593639 MTMR7Q9Y216 660 aa10.9□□□□□ -0.66
SRRM1-221ENST00000593639 SCN5AQ14524 2016 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 ABHD14A-ACY1A0A1B0GW23 586 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 TXNP10599 105 aaKnown RBP10.89□□□□□ -0.67
SRRM1-221ENST00000593639 PPARAQ07869 468 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 RBL2Q08999 1139 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 TSHZ3Q63HK5 1081 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 SESTD1Q86VW0 696 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 CCDC155Q8N6L0 562 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 SCFD2Q8WU76 684 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 AFG1LQ8WV93 481 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 KAT2BQ92831 832 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 SEC62Q99442 399 aaKnown RBP10.89□□□□□ -0.67
SRRM1-221ENST00000593639 INCENPQ9NQS7 918 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 ECHDC1Q9NTX5 307 aa10.89□□□□□ -0.67
SRRM1-221ENST00000593639 COL4A4P53420 1690 aaPredicted RBP10.89□□□□□ -0.67
SRRM1-221ENST00000593639 TET1Q8NFU7 2136 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 MMP3P08254 477 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 CKBP12277 381 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 NOVP48745 357 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 RPS6P62753 249 aaKnown RBP10.88□□□□□ -0.67
SRRM1-221ENST00000593639 ZP2Q05996 745 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 PDE4DQ08499 809 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 MBTPS1Q14703 1052 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 CCDC96Q2M329 555 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 SYDE2Q5VT97 1194 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.88□□□□□ -0.679e-11■■■□□ 16.3
SRRM1-221ENST00000593639 RNF207Q6ZRF8 634 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 HFE2Q6ZVN8 426 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 FBXO22Q8NEZ5 403 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 CFAP54Q96N23 3096 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 NACAP1Q9BZK3 213 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 LRRCC1Q9C099 1032 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 KCNH6Q9H252 994 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.88□□□□□ -0.67
SRRM1-221ENST00000593639 SCN10AQ9Y5Y9 1956 aa10.88□□□□□ -0.67
SRRM1-221ENST00000593639 C5orf42Q9H799 3197 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 TSPY2A6NKD2 308 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 ZFYP08048 801 aaPredicted RBP10.87□□□□□ -0.67
SRRM1-221ENST00000593639 SLC3A2P08195 630 aaKnown RBP10.87□□□□□ -0.67
SRRM1-221ENST00000593639 PUS10Q3MIT2 529 aaKnown RBP10.87□□□□□ -0.67
SRRM1-221ENST00000593639 CCDC62Q6P9F0 684 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 BTNL9Q6UXG8 535 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 DCAF4Q8WV16 495 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 WNT8BQ93098 351 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 MRPL38Q96DV4 380 aaKnown RBP10.87□□□□□ -0.67
SRRM1-221ENST00000593639 CRBNQ96SW2 442 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 PHOX2BQ99453 314 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 NAPBQ9H115 298 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 GTF2IRD1Q9UHL9 959 aa10.87□□□□□ -0.67
SRRM1-221ENST00000593639 FRMPD2Q68DX3 1309 aaPredicted RBP10.86□□□□□ -0.67
SRRM1-221ENST00000593639 C19orf67A6NJJ6 358 aa10.86□□□□□ -0.67
SRRM1-221ENST00000593639 FOXP2O15409 715 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms