RNA–Protein interactions for RNA: ENST00000593280.2

NPC1-214, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 1 (best)

Gene NPC1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-214ENST00000593280 CCDC144BQ3MJ40 725 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 KRT79Q5XKE5 535 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 KLHL10Q6JEL2 608 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 SMYD4Q8IYR2 804 aaPredicted RBP13.42□□□□□ -0.26
NPC1-214ENST00000593280 SNX29Q8TEQ0 813 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 LRRC15Q8TF66 581 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 CRYGNQ8WXF5 182 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 P2RX7Q99572 595 aaKnown RBP13.42□□□□□ -0.26
NPC1-214ENST00000593280 FHDC1Q9C0D6 1143 aaPredicted RBP13.42□□□□□ -0.26
NPC1-214ENST00000593280 FBXO28Q9NVF7 368 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 STK17AQ9UEE5 414 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 MRPL11Q9Y3B7 192 aaKnown RBP13.42□□□□□ -0.26
NPC1-214ENST00000593280 ABCB11O95342 1321 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 PPP1R3GB7ZBB8 358 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 UBASH3AP57075 661 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 AMPD3Q01432 767 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 GRB10Q13322 594 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 KCNB1Q14721 858 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 SPATA1Q5VX52 437 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 SLFN12Q8IYM2 578 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 CCDC47Q96A33 483 aaKnown RBP13.42□□□□□ -0.26
NPC1-214ENST00000593280 KCNMB3Q9NPA1 279 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 GGA3Q9NZ52 723 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 IMPACTQ9P2X3 320 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 PCDHA12Q9UN75 941 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 CTNND2Q9UQB3 1225 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 PPP2R3BQ9Y5P8 575 aa13.42□□□□□ -0.26
NPC1-214ENST00000593280 GCOM1H8Y6P7 765 aaPredicted RBP13.41□□□□□ -0.26
NPC1-214ENST00000593280 POLR2MP0CAP2 368 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 ZNF18P17022 549 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 INPP5BP32019 993 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 KMT5BQ4FZB7 885 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 Q4G0T1 1027 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 SCYL3Q8IZE3 742 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 PNMA5Q96PV4 448 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 MED15Q96RN5 788 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 C7orf25Q9BPX7 421 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 SLF1Q9BQI6 1058 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 EHMT1Q9H9B1 1298 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 KDM3AQ9Y4C1 1321 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 PARP14Q460N5 1801 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 SMCHD1A6NHR9 2005 aa13.41□□□□□ -0.26
NPC1-214ENST00000593280 PHIPQ8WWQ0 1821 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 TBX3O15119 743 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 SLC26A4O43511 780 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 KLRC4O43908 158 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 CFBP00751 764 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 CDK11BP21127 795 aaKnown RBP13.4□□□□□ -0.26
NPC1-214ENST00000593280 USP14P54578 494 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 STX17P56962 302 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 GSDMDP57764 484 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 ASIC1P78348 528 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 MTMR2Q13614 643 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 TMEM119Q4V9L6 283 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 PRR16Q569H4 304 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 SV2BQ7L1I2 683 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 TMC6Q7Z403 805 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 FILIP1Q7Z7B0 1213 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 FCHSD1Q86WN1 690 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 LDHDQ86WU2 507 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 PRPF38AQ8NAV1 312 aaKnown RBP13.4□□□□□ -0.26
NPC1-214ENST00000593280 GJA10Q969M2 543 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 WRNIP1Q96S55 665 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 TRIM9Q9C026 710 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 TANGO6Q9C0B7 1094 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 AS3MTQ9HBK9 375 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 PICK1Q9NRD5 415 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 RWDD2AQ9UIY3 292 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 ZNF112Q9UJU3 913 aa13.4□□□□□ -0.26
NPC1-214ENST00000593280 RHOBTB3O94955 611 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 ICAM1P05362 532 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 CYP3A4P08684 503 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 CIITAP33076 1130 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 ZNF76P36508 570 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 EPS15P42566 896 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 PAK1Q13153 545 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 TPD52L1Q16890 204 aaPredicted RBP13.39□□□□□ -0.27
NPC1-214ENST00000593280 HSP90AA4PQ58FG1 418 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 ETNPPLQ8TBG4 499 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 LARP4BQ92615 738 aaKnown RBP13.39□□□□□ -0.27
NPC1-214ENST00000593280 RAD54LQ92698 747 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 GTPBP4Q9BZE4 634 aaKnown RBP13.39□□□□□ -0.27
NPC1-214ENST00000593280 BLOC1S4Q9NUP1 217 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 EXOC1Q9NV70 894 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 CCPG1Q9ULG6 757 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 GDAQ9Y2T3 454 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 FAM86B1E9PN63 330 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 FAM86B2P0C5J1 330 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 VCAM1P19320 739 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 CCT6AP40227 531 aaKnown RBP13.39□□□□□ -0.27
NPC1-214ENST00000593280 LRMPQ12912 555 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 STIM1Q13586 685 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 DHX8Q14562 1220 aaKnown RBP13.39□□□□□ -0.27
NPC1-214ENST00000593280 PRAMEF18Q5VWM3 479 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 CACTINQ8WUQ7 758 aaKnown RBP13.39□□□□□ -0.27
NPC1-214ENST00000593280 NELFBQ8WX92 580 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 LENG9Q96B70 501 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 NUDT12Q9BQG2 462 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 WDR18Q9BV38 432 aa13.39□□□□□ -0.27
NPC1-214ENST00000593280 LRRC27Q9C0I9 530 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms