RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 ABCB11O95342 1321 aa15.35■□□□□ 0.05
VMP1-217ENST00000593168 A0A0G2JLL6 359 aaPredicted RBP15.34■□□□□ 0.05
VMP1-217ENST00000593168 A0A1W2PQ27 194 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 A0A1W2PQ64 194 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 A0A1W2PQD8 194 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 ZBED4O75132 1171 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 FARP2O94887 1054 aaPredicted RBP15.34■□□□□ 0.05
VMP1-217ENST00000593168 ICAM1P05362 532 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 ATP2B1P20020 1258 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 DSG3P32926 999 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 ME1P48163 572 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 FCGRTP55899 365 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 COG2Q14746 738 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 JAKMIP3Q5VZ66 844 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 CCDC174Q6PII3 467 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 PRRT2Q7Z6L0 340 aaPredicted RBP15.34■□□□□ 0.05
VMP1-217ENST00000593168 PROCA1Q8NCQ7 364 aaPredicted RBP15.34■□□□□ 0.05
VMP1-217ENST00000593168 SLAIN1Q8ND83 568 aa15.34■□□□□ 0.05
VMP1-217ENST00000593168 PARK7Q99497 189 aaKnown RBP15.34■□□□□ 0.05
VMP1-217ENST00000593168 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
VMP1-217ENST00000593168 PIK3CDO00329 1044 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 SGPL1O95470 568 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 FOSP01100 380 aaPredicted RBP15.33■□□□□ 0.04
VMP1-217ENST00000593168 AP3B2Q13367 1082 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 ORC2Q13416 577 aaPredicted RBP15.33■□□□□ 0.04
VMP1-217ENST00000593168 INF2Q27J81 1249 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 USH1GQ495M9 461 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 AXDND1Q5T1B0 1012 aaPredicted RBP15.33■□□□□ 0.04
VMP1-217ENST00000593168 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 TMEM260Q9NX78 707 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 HOXC10Q9NYD6 342 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 NR2E3Q9Y5X4 410 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 ZNF536O15090 1300 aa15.33■□□□□ 0.04
VMP1-217ENST00000593168 VWA5AO00534 786 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 SOX1O00570 391 aaPredicted RBP15.32■□□□□ 0.04
VMP1-217ENST00000593168 MEIS2O14770 477 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 ADCY3O60266 1144 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 CUTAO60888 179 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 ELNP15502 786 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 PTPREP23469 700 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 HOXA7P31268 230 aaPredicted RBP15.32■□□□□ 0.04
VMP1-217ENST00000593168 OAZ1P54368 228 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 NEK8Q86SG6 692 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 SAMD3Q8N6K7 520 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
VMP1-217ENST00000593168 DOCK3Q8IZD9 2030 aa15.32■□□□□ 0.04
VMP1-217ENST00000593168 WNT7AO00755 349 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 OPLAHO14841 1288 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 ATP2A1O14983 1001 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 CMA1P23946 247 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 MARCKSP29966 332 aaPredicted RBP15.31■□□□□ 0.04
VMP1-217ENST00000593168 FLT3LGP49771 235 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 ZNF174Q15697 407 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 UBE2SQ16763 222 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 SAMD1Q6SPF0 538 aaPredicted RBP15.31■□□□□ 0.04
VMP1-217ENST00000593168 FASTKD5Q7L8L6 764 aaKnown RBP15.31■□□□□ 0.04
VMP1-217ENST00000593168 KRI1Q8N9T8 703 aaKnown RBP15.31■□□□□ 0.04
VMP1-217ENST00000593168 ZNF579Q8NAF0 562 aaKnown RBP15.31■□□□□ 0.04
VMP1-217ENST00000593168 REPS2Q8NFH8 660 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 TBCKQ8TEA7 893 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 SYAP1Q96A49 352 aaPredicted RBP15.31■□□□□ 0.04
VMP1-217ENST00000593168 ATG4CQ96DT6 458 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 CCPG1Q9ULG6 757 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 SRPRBQ9Y5M8 271 aaKnown RBP15.31■□□□□ 0.04
VMP1-217ENST00000593168 PARP14Q460N5 1801 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 RLFQ13129 1914 aa15.31■□□□□ 0.04
VMP1-217ENST00000593168 INHAP05111 366 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 ATP2C1P98194 919 aaPredicted RBP15.3■□□□□ 0.04
VMP1-217ENST00000593168 GHRHRQ02643 423 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 USP17L6PQ6QN14 398 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 GADL1Q6ZQY3 521 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 MCF2L2Q86YR7 1114 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 CCAR1Q8IX12 1150 aaKnown RBP15.3■□□□□ 0.04
VMP1-217ENST00000593168 C4orf32Q8N8J7 132 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 FERMT2Q96AC1 680 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 AGBL1Q96MI9 1066 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 NAP1L4Q99733 375 aaKnown RBP15.3■□□□□ 0.04
VMP1-217ENST00000593168 RAVER2Q9HCJ3 691 aaKnown RBP15.3■□□□□ 0.04
VMP1-217ENST00000593168 MAP3K20Q9NYL2 800 aaKnown RBP15.3■□□□□ 0.04
VMP1-217ENST00000593168 FBXO2Q9UK22 296 aaPredicted RBP15.3■□□□□ 0.04
VMP1-217ENST00000593168 COL6A3P12111 3177 aa15.3■□□□□ 0.04
VMP1-217ENST00000593168 SMCHD1A6NHR9 2005 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 GCOM1H8Y6P7 765 aaPredicted RBP15.29■□□□□ 0.04
VMP1-217ENST00000593168 LAD1O00515 517 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 EVI5O60447 810 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 POLR2MP0CAP2 368 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 MCM7P33993 719 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 USP11P51784 963 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 PTGDRQ13258 359 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 TREML2Q5T2D2 321 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 ARL6IP4Q66PJ3 421 aaKnown RBP15.29■□□□□ 0.04
VMP1-217ENST00000593168 CAVIN1Q6NZI2 390 aaKnown RBP15.29■□□□□ 0.04
VMP1-217ENST00000593168 CPXCR1Q8N123 301 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 SLC17A8Q8NDX2 589 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 MRPS27Q92552 414 aaKnown RBP15.29■□□□□ 0.04
VMP1-217ENST00000593168 LRCH3Q96II8 777 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 ANO3Q9BYT9 981 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 MAF1Q9H063 256 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 AGTPBP1Q9UPW5 1226 aa15.29■□□□□ 0.04
VMP1-217ENST00000593168 LOC285556D6RIA3 1793 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms