RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 FAM109BQ6ICB4 259 aaPredicted RBP17.28■□□□□ 0.36
SF3A2-207ENST00000592839 EMID1Q96A84 441 aaPredicted RBP17.28■□□□□ 0.36
SF3A2-207ENST00000592839 AP5M1Q9H0R1 490 aa17.28■□□□□ 0.36
SF3A2-207ENST00000592839 PNMA6FA0A0J9YX94 578 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
SF3A2-207ENST00000592839 CPT1AP50416 773 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 PURAQ00577 322 aaKnown RBP17.27■□□□□ 0.36
SF3A2-207ENST00000592839 PPP2R5BQ15173 497 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 TMEM67Q5HYA8 995 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 TMEM63BQ5T3F8 832 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 EEPD1Q7L9B9 569 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 TEX2Q8IWB9 1127 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 ZNF654Q8IZM8 581 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 TBC1D5Q92609 795 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 BADQ92934 168 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 LZTS2Q9BRK4 669 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 POLR3EQ9NVU0 708 aa17.27■□□□□ 0.36
SF3A2-207ENST00000592839 CDH23Q9H251 3354 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 DYNC1LI2O43237 492 aaPredicted RBP17.26■□□□□ 0.35
SF3A2-207ENST00000592839 KPNA6O60684 536 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 PQBP1O60828 265 aaKnown RBP17.26■□□□□ 0.35
SF3A2-207ENST00000592839 TIMP1P01033 207 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 BEX3Q00994 111 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 TTLL4Q14679 1199 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 CXCL17Q6UXB2 119 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 KCNB2Q92953 911 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 TAAR1Q96RJ0 339 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 RMDN3Q96TC7 470 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 PXMP2Q9NR77 195 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 PCDHA1Q9Y5I3 950 aa17.26■□□□□ 0.35
SF3A2-207ENST00000592839 EPB41L2O43491 1005 aaKnown RBP17.25■□□□□ 0.35
SF3A2-207ENST00000592839 PRC1O43663 620 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 CDC45O75419 566 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 EIF3JO75822 258 aaKnown RBP17.25■□□□□ 0.35
SF3A2-207ENST00000592839 HOXD8P13378 290 aaPredicted RBP17.25■□□□□ 0.35
SF3A2-207ENST00000592839 KIF5BP33176 963 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 RNF20Q5VTR2 975 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 MFSD5Q6N075 450 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 Q7L0L9 218 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 PDCD2LQ9BRP1 358 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 ANO2Q9NQ90 1003 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 PRDM5Q9NQX1 630 aaPredicted RBP17.25■□□□□ 0.35
SF3A2-207ENST00000592839 TMEM39AQ9NV64 488 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 MTMR10Q9NXD2 777 aa17.25■□□□□ 0.35
SF3A2-207ENST00000592839 PIK3CDO00329 1044 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 ARIH2O95376 493 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 CALM1P0DP23 149 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 CALM2P0DP24 149 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 CALM3P0DP25 149 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 RAG1P15918 1043 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 GNAQP50148 359 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 RCAN1P53805 252 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 PTPN11Q06124 597 aaPredicted RBP17.24■□□□□ 0.35
SF3A2-207ENST00000592839 ITGA7Q13683 1181 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 COL9A3Q14050 684 aaPredicted RBP17.24■□□□□ 0.35
SF3A2-207ENST00000592839 STXBP2Q15833 593 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 RASIP1Q5U651 963 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 CASC1Q6TDU7 716 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 PIGSQ96S52 555 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 STXBP5LQ9Y2K9 1186 aa17.24■□□□□ 0.35
SF3A2-207ENST00000592839 TLR3O15455 904 aaKnown RBP17.23■□□□□ 0.35
SF3A2-207ENST00000592839 DHX16O60231 1041 aaKnown RBP17.23■□□□□ 0.35
SF3A2-207ENST00000592839 PTGS1P23219 599 aa17.23■□□□□ 0.35
SF3A2-207ENST00000592839 SMAD3P84022 425 aaKnown RBP17.23■□□□□ 0.35
SF3A2-207ENST00000592839 FPGSQ05932 587 aa17.23■□□□□ 0.35
SF3A2-207ENST00000592839 NFRKBQ6P4R8 1299 aa17.23■□□□□ 0.35
SF3A2-207ENST00000592839 VSIG10LQ86VR7 867 aa17.23■□□□□ 0.35
SF3A2-207ENST00000592839 SESTD1Q86VW0 696 aa17.23■□□□□ 0.35
SF3A2-207ENST00000592839 FBXL16Q8N461 479 aa17.23■□□□□ 0.35
SF3A2-207ENST00000592839 CTCFLQ8NI51 663 aaPredicted RBP17.23■□□□□ 0.35
SF3A2-207ENST00000592839 VAT1LQ9HCJ6 419 aa17.23■□□□□ 0.35
SF3A2-207ENST00000592839 TANC1Q9C0D5 1861 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 TMEM265A0A087WTH1 108 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 STAM2O75886 525 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 RGS20O76081 388 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 NR3C2P08235 984 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 TXNP10599 105 aaKnown RBP17.22■□□□□ 0.35
SF3A2-207ENST00000592839 TGFB3P10600 412 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 EXOSC10Q01780 885 aaKnown RBP17.22■□□□□ 0.35
SF3A2-207ENST00000592839 ARHGAP1Q07960 439 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 SHHQ15465 462 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 BRDTQ58F21 947 aaPredicted RBP17.22■□□□□ 0.35
SF3A2-207ENST00000592839 C9orf50Q5SZB4 431 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 KCNV1Q6PIU1 500 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 NOL8Q76FK4 1167 aaKnown RBP17.22■□□□□ 0.35
SF3A2-207ENST00000592839 OR6J1Q8NGC5 347 aa17.22■□□□□ 0.35
SF3A2-207ENST00000592839 MTG1Q9BT17 334 aaPredicted RBP17.22■□□□□ 0.35
SF3A2-207ENST00000592839 DDX41Q9UJV9 622 aaKnown RBP17.22■□□□□ 0.35
SF3A2-207ENST00000592839 NID2Q14112 1375 aa17.21■□□□□ 0.35
SF3A2-207ENST00000592839 CFBP00751 764 aa17.21■□□□□ 0.35
SF3A2-207ENST00000592839 GH1P01241 217 aa17.21■□□□□ 0.35
SF3A2-207ENST00000592839 EPHB4P54760 987 aa17.21■□□□□ 0.35
SF3A2-207ENST00000592839 KRT32Q14532 448 aa17.21■□□□□ 0.35
SF3A2-207ENST00000592839 PGM5Q15124 567 aa17.21■□□□□ 0.35
SF3A2-207ENST00000592839 ARHGEF16Q5VV41 709 aa17.21■□□□□ 0.35
SF3A2-207ENST00000592839 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
SF3A2-207ENST00000592839 ALDH8A1Q9H2A2 487 aaPredicted RBP17.21■□□□□ 0.35
SF3A2-207ENST00000592839 GPHNQ9NQX3 736 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms