RNA–Protein interactions for RNA: ENST00000592578.5

PSME3-215, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-215ENST00000592578 GJD3Q8N144 294 aa16.75■□□□□ 0.27
PSME3-215ENST00000592578 ESR2Q92731 530 aa16.75■□□□□ 0.27
PSME3-215ENST00000592578 TMEM47Q9BQJ4 181 aa16.75■□□□□ 0.27
PSME3-215ENST00000592578 HOMER2Q9NSB8 354 aa16.75■□□□□ 0.27
PSME3-215ENST00000592578 PRR12Q9ULL5 1215 aa16.75■□□□□ 0.27
PSME3-215ENST00000592578 REV3LO60673 3130 aa16.75■□□□□ 0.27
PSME3-215ENST00000592578 ZNF536O15090 1300 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 GRIN2DO15399 1336 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 CPT1AP50416 773 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 PSMC6P62333 389 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 IRX6P78412 446 aaPredicted RBP16.74■□□□□ 0.27
PSME3-215ENST00000592578 BFSP2Q13515 415 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 PUS10Q3MIT2 529 aaKnown RBP16.74■□□□□ 0.27
PSME3-215ENST00000592578 KRT40Q6A162 431 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 TBC1D10CQ8IV04 446 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 FAM133AQ8N9E0 248 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 FGD4Q96M96 766 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 ZBED2Q9BTP6 218 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 DSCC1Q9BVC3 393 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 RNF146Q9NTX7 359 aa16.74■□□□□ 0.27
PSME3-215ENST00000592578 ASTN1O14525 1302 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 RAD50Q92878 1312 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 ALAS1P13196 640 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 SMPD1P17405 629 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 CNTN2Q02246 1040 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 FAM47CQ5HY64 1035 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 KIAA1211Q6ZU35 1233 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 RASGRP2Q7LDG7 609 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 TRERF1Q96PN7 1200 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 VTA1Q9NP79 307 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 CTNNA3Q9UI47 895 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 NOD1Q9Y239 953 aa16.73■□□□□ 0.27
PSME3-215ENST00000592578 TRANK1O15050 2925 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 EPOPA6NHQ4 379 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 CYP2C9P11712 490 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 PDE4AP27815 886 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 IMMTQ16891 758 aaKnown RBP16.72■□□□□ 0.27
PSME3-215ENST00000592578 CCDC178Q5BJE1 867 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 TTC22Q5TAA0 569 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 BTNL9Q6UXG8 535 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 IQCA1Q86XH1 822 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 CCDC155Q8N6L0 562 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 KHSRPQ92945 711 aaKnown RBP eCLIP16.72■□□□□ 0.27
PSME3-215ENST00000592578 SNX27Q96L92 541 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 UBE2ZQ9H832 354 aaPredicted RBP16.72■□□□□ 0.27
PSME3-215ENST00000592578 TRMT13Q9NUP7 481 aaKnown RBP16.72■□□□□ 0.27
PSME3-215ENST00000592578 CCPG1Q9ULG6 757 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 FAM50BQ9Y247 325 aa16.72■□□□□ 0.27
PSME3-215ENST00000592578 NEDD4P46934 1319 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 KPNA6O60684 536 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 ICAM1P05362 532 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 PDHBP11177 359 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 SLC16A2P36021 539 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 SNAP25P60880 206 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 LEXMQ3ZCV2 418 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 DGKHQ86XP1 1220 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 FAM178BQ8IXR5 827 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 MTG1Q9BT17 334 aaPredicted RBP16.71■□□□□ 0.27
PSME3-215ENST00000592578 RANBP17Q9H2T7 1088 aaKnown RBP16.71■□□□□ 0.27
PSME3-215ENST00000592578 GPCPD1Q9NPB8 672 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 A1CFQ9NQ94 594 aaKnown RBP16.71■□□□□ 0.27
PSME3-215ENST00000592578 PNMA2Q9UL42 364 aa16.71■□□□□ 0.27
PSME3-215ENST00000592578 FRMPD2Q68DX3 1309 aaPredicted RBP16.7■□□□□ 0.26
PSME3-215ENST00000592578 MYL3P08590 195 aa16.7■□□□□ 0.26
PSME3-215ENST00000592578 IQCF3P0C7M6 154 aa16.7■□□□□ 0.26
PSME3-215ENST00000592578 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
PSME3-215ENST00000592578 PTPN11Q06124 597 aaPredicted RBP16.7■□□□□ 0.26
PSME3-215ENST00000592578 DUSP28Q4G0W2 176 aa16.7■□□□□ 0.26
PSME3-215ENST00000592578 NFRKBQ6P4R8 1299 aa16.7■□□□□ 0.26
PSME3-215ENST00000592578 EEPD1Q7L9B9 569 aa16.7■□□□□ 0.26
PSME3-215ENST00000592578 RUFY2Q8WXA3 655 aa16.7■□□□□ 0.26
PSME3-215ENST00000592578 MPHOSPH6Q99547 160 aaKnown RBP16.7■□□□□ 0.26
PSME3-215ENST00000592578 ZKSCAN3Q9BRR0 538 aa16.7■□□□□ 0.26
PSME3-215ENST00000592578 ADD3Q9UEY8 706 aaKnown RBP16.7■□□□□ 0.26
PSME3-215ENST00000592578 SCN5AQ14524 2016 aa16.7■□□□□ 0.26
PSME3-215ENST00000592578 SOWAHBA6NEL2 793 aa16.69■□□□□ 0.26
PSME3-215ENST00000592578 KDM4AO75164 1064 aa16.69■□□□□ 0.26
PSME3-215ENST00000592578 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
PSME3-215ENST00000592578 SNHG28P0DPA3 235 aa16.69■□□□□ 0.26
PSME3-215ENST00000592578 NHLH1Q02575 133 aa16.69■□□□□ 0.26
PSME3-215ENST00000592578 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
PSME3-215ENST00000592578 FBXO16Q8IX29 292 aaPredicted RBP16.69■□□□□ 0.26
PSME3-215ENST00000592578 TGS1Q96RS0 853 aaKnown RBP16.69■□□□□ 0.26
PSME3-215ENST00000592578 KRT23Q9C075 422 aa16.69■□□□□ 0.26
PSME3-215ENST00000592578 LOC102724159A0A0B4J2E5 919 aa16.68■□□□□ 0.26
PSME3-215ENST00000592578 B4E1Z4 1266 aa16.68■□□□□ 0.26
PSME3-215ENST00000592578 DCXO43602 365 aa16.68■□□□□ 0.26
PSME3-215ENST00000592578 KCNA5P22460 613 aa16.68■□□□□ 0.26
PSME3-215ENST00000592578 PURAQ00577 322 aaKnown RBP16.68■□□□□ 0.26
PSME3-215ENST00000592578 PWP2Q15269 919 aaKnown RBP16.68■□□□□ 0.26
PSME3-215ENST00000592578 MUM1L1Q5H9M0 696 aa16.68■□□□□ 0.26
PSME3-215ENST00000592578 GPATCH4Q5T3I0 446 aaKnown RBP16.68■□□□□ 0.26
PSME3-215ENST00000592578 PTCRAQ6ISU1 281 aaPredicted RBP16.68■□□□□ 0.26
PSME3-215ENST00000592578 TAPT1Q6NXT6 567 aa16.68■□□□□ 0.26
PSME3-215ENST00000592578 NSMFQ6X4W1 530 aa16.68■□□□□ 0.26
PSME3-215ENST00000592578 VWCEQ96DN2 955 aa16.68■□□□□ 0.26
PSME3-215ENST00000592578 CNNM2Q9H8M5 875 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms