RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 FPGSQ05932 587 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 PPP2R5BQ15173 497 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 STXBP2Q15833 593 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 BRDTQ58F21 947 aaPredicted RBP11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 TMEM87BQ96K49 555 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 SENP2Q9HC62 589 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 POLR3EQ9NVU0 708 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 COL20A1Q9P218 1284 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 GRIN2DO15399 1336 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 MCM3APO60318 1980 aa11.27□□□□□ -0.61
PRKCSH-215ENST00000592435 A6NJR5 290 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 OPLAHO14841 1288 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 SLC27A2O14975 620 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 PRC1O43663 620 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 CYTH3O43739 400 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 EIF3JO75822 258 aaKnown RBP11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 SMARCA1P28370 1054 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 KIF5BP33176 963 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 PURAQ00577 322 aaKnown RBP11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 TTLL4Q14679 1199 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 SLC35G1Q2M3R5 365 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 C9orf50Q5SZB4 431 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 ARHGEF16Q5VV41 709 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 FAM109BQ6ICB4 259 aaPredicted RBP11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 MFSD5Q6N075 450 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 CCDC62Q6P9F0 684 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 CASC1Q6TDU7 716 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 DEFB123Q8N688 67 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 OR6J1Q8NGC5 347 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 PIGSQ96S52 555 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 LY9Q9HBG7 655 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 ANO2Q9NQ90 1003 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
PRKCSH-215ENST00000592435 LCTP09848 1927 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 DDAH1O94760 285 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 NR3C2P08235 984 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 LIFRP42702 1097 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 EPHB4P54760 987 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 RNF20Q5VTR2 975 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 HOMER1Q86YM7 354 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 TMEM199Q8N511 208 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 CTCFLQ8NI51 663 aaPredicted RBP11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 LZTS2Q9BRK4 669 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 LAMA2P24043 3122 aaKnown RBP11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 LTBP2Q14767 1821 aa11.25□□□□□ -0.61
PRKCSH-215ENST00000592435 LRRC37A2A6NM11 1700 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 SUPT20HL2P0C7V6 817 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 CALM1P0DP23 149 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 CALM2P0DP24 149 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 CALM3P0DP25 149 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 EIF2AK2P19525 551 aaKnown RBP11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 GNAQP50148 359 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 PSMC6P62333 389 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 SMAD3P84022 425 aaKnown RBP11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 PPIGQ13427 754 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 TSGA10IPQ3SY00 556 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 VSIG10LQ86VR7 867 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 SKAP1Q86WV1 359 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 ZNF654Q8IZM8 581 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 COPS5Q92905 334 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 TRPV6Q9H1D0 765 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 ALDH8A1Q9H2A2 487 aaPredicted RBP11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 MTMR10Q9NXD2 777 aa11.24□□□□□ -0.61
PRKCSH-215ENST00000592435 CCDC69A6NI79 296 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 GCOM1H8Y6P7 765 aaPredicted RBP11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 SH2B2O14492 632 aaPredicted RBP11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 B4GALT4O60513 344 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 ARIH2O95376 493 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 GH1P01241 217 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 MYL3P08590 195 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 POLR2MP0CAP2 368 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 TGFB3P10600 412 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 CSF2RAP15509 400 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 HOXA13P31271 388 aaPredicted RBP11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 LY6KQ17RY6 165 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 NFRKBQ6P4R8 1299 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 KCNV1Q6PIU1 500 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 NFXL1Q6ZNB6 911 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 SEPT14Q6ZU15 432 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 Q7L0L9 218 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 EMID1Q96A84 441 aaPredicted RBP11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 RRP36Q96EU6 259 aaKnown RBP11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 CCDC136Q96JN2 1154 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 RNPC3Q96LT9 517 aaKnown RBP11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 HIPK3Q9H422 1215 aa11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 DDX41Q9UJV9 622 aaKnown RBP11.23□□□□□ -0.61
PRKCSH-215ENST00000592435 CDC45O75419 566 aa11.22□□□□□ -0.61
PRKCSH-215ENST00000592435 CYP2C18P33260 490 aa11.22□□□□□ -0.61
PRKCSH-215ENST00000592435 PTPN11Q06124 597 aaPredicted RBP11.22□□□□□ -0.61
PRKCSH-215ENST00000592435 ARHGAP1Q07960 439 aa11.22□□□□□ -0.61
PRKCSH-215ENST00000592435 LAMC2Q13753 1193 aa11.22□□□□□ -0.61
PRKCSH-215ENST00000592435 COL9A3Q14050 684 aaPredicted RBP11.22□□□□□ -0.61
PRKCSH-215ENST00000592435 PGM5Q15124 567 aa11.22□□□□□ -0.61
PRKCSH-215ENST00000592435 NBPF20Q3BBV1 942 aa11.22□□□□□ -0.61
PRKCSH-215ENST00000592435 TMEM240Q5SV17 173 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms