RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 PPP1R9AQ9ULJ8 1098 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 SPTBN2O15020 2390 aa8.86□□□□□ -0.99
VAT1-209ENST00000592388 MAP1BP46821 2468 aaKnown RBP8.85□□□□□ -0.99
VAT1-209ENST00000592388 RAD21O60216 631 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 NUBP1P53384 320 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 BFSP2Q13515 415 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 PUM1Q14671 1186 aaKnown RBP eCLIP8.85□□□□□ -0.99
VAT1-209ENST00000592388 TCTN1Q2MV58 587 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 CTC1Q2NKJ3 1217 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 TMED8Q6PL24 325 aaPredicted RBP8.85□□□□□ -0.99
VAT1-209ENST00000592388 SIAH1Q8IUQ4 282 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 KIAA2013Q8IYS2 634 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 CPXCR1Q8N123 301 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 STK11IPQ8N1F8 1099 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 TEX13BQ9BXU2 312 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 LRRCC1Q9C099 1032 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 PUS7LQ9H0K6 701 aaKnown RBP8.85□□□□□ -0.99
VAT1-209ENST00000592388 IGFLR1Q9H665 355 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 ARHGEF10LQ9HCE6 1279 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 PDGFCQ9NRA1 345 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 CD207Q9UJ71 328 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 TMX2Q9Y320 296 aa8.85□□□□□ -0.99
VAT1-209ENST00000592388 DDX49Q9Y6V7 483 aaKnown RBP8.85□□□□□ -0.99
VAT1-209ENST00000592388 MYH6P13533 1939 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 LOC730098B7Z3J9 87 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 USP17L12C9JPN9 530 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 USP17L21D6R901 530 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 H3BNC9 293 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 NCK2O43639 380 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 TBX10O75333 385 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 CSPG5O95196 566 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 MYL3P08590 195 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 GTF2F1P35269 517 aaKnown RBP eCLIP8.84□□□□□ -0.99
VAT1-209ENST00000592388 ICA1Q05084 483 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 GPNMBQ14956 572 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 MCTP2Q6DN12 878 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 CNKSR3Q6P9H4 555 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 TMEM179Q6ZVK1 233 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 EEPD1Q7L9B9 569 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.84□□□□□ -0.99
VAT1-209ENST00000592388 NOD1Q9Y239 953 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 INSL6Q9Y581 213 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 SLC4A4Q9Y6R1 1079 aa8.84□□□□□ -0.99
VAT1-209ENST00000592388 LAMA4Q16363 1823 aa8.83□□□□□ -1
VAT1-209ENST00000592388 LINC01565O15544 149 aa8.83□□□□□ -1
VAT1-209ENST00000592388 CDK8P49336 464 aa8.83□□□□□ -1
VAT1-209ENST00000592388 CHMP4BP1P59074 171 aa8.83□□□□□ -1
VAT1-209ENST00000592388 CNTN2Q02246 1040 aa8.83□□□□□ -1
VAT1-209ENST00000592388 HYAL1Q12794 435 aa8.83□□□□□ -1
VAT1-209ENST00000592388 FAM83BQ5T0W9 1011 aa8.83□□□□□ -1
VAT1-209ENST00000592388 C12orf60Q5U649 245 aa8.83□□□□□ -1
VAT1-209ENST00000592388 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.83□□□□□ -1
VAT1-209ENST00000592388 C16orf86Q6ZW13 317 aa8.83□□□□□ -1
VAT1-209ENST00000592388 TMEM105Q8N8V8 129 aa8.83□□□□□ -1
VAT1-209ENST00000592388 KCNG4Q8TDN1 519 aa8.83□□□□□ -1
VAT1-209ENST00000592388 RPGRIP1Q96KN7 1286 aa8.83□□□□□ -1
VAT1-209ENST00000592388 RIPOR3Q96MK2 946 aa8.83□□□□□ -1
VAT1-209ENST00000592388 SH2D4AQ9H788 454 aa8.83□□□□□ -1
VAT1-209ENST00000592388 EPB41L4AQ9HCS5 686 aaPredicted RBP8.83□□□□□ -1
VAT1-209ENST00000592388 SWAP70Q9UH65 585 aa8.83□□□□□ -1
VAT1-209ENST00000592388 DMXL1Q9Y485 3027 aa8.83□□□□□ -1
VAT1-209ENST00000592388 TRIP12Q14669 1992 aaPredicted RBP8.82□□□□□ -1
VAT1-209ENST00000592388 CHD6Q8TD26 2715 aa8.82□□□□□ -1
VAT1-209ENST00000592388 ABHD14A-ACY1A0A1B0GW23 586 aa8.82□□□□□ -1
VAT1-209ENST00000592388 M0R2C6 588 aa8.82□□□□□ -1
VAT1-209ENST00000592388 EEF2P13639 858 aaKnown RBP8.82□□□□□ -1
VAT1-209ENST00000592388 NDUFV1P49821 464 aa8.82□□□□□ -1
VAT1-209ENST00000592388 PURAQ00577 322 aaKnown RBP8.82□□□□□ -1
VAT1-209ENST00000592388 CBX2Q14781 532 aaPredicted RBP8.82□□□□□ -1
VAT1-209ENST00000592388 UBE3CQ15386 1083 aa8.82□□□□□ -1
VAT1-209ENST00000592388 LRRFIP1Q32MZ4 808 aaKnown RBP8.82□□□□□ -1
VAT1-209ENST00000592388 CTR9Q6PD62 1173 aa8.82□□□□□ -1
VAT1-209ENST00000592388 FBXO16Q8IX29 292 aaPredicted RBP8.82□□□□□ -1
VAT1-209ENST00000592388 TMEM192Q8IY95 271 aa8.82□□□□□ -1
VAT1-209ENST00000592388 MYOCDQ8IZQ8 938 aa8.82□□□□□ -1
VAT1-209ENST00000592388 OTUD7AQ8TE49 926 aaPredicted RBP8.82□□□□□ -1
VAT1-209ENST00000592388 SAMD11Q96NU1 681 aa8.82□□□□□ -1
VAT1-209ENST00000592388 SLF1Q9BQI6 1058 aa8.82□□□□□ -1
VAT1-209ENST00000592388 MTG1Q9BT17 334 aaPredicted RBP8.82□□□□□ -1
VAT1-209ENST00000592388 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.82□□□□□ -1
VAT1-209ENST00000592388 RAVER2Q9HCJ3 691 aaKnown RBP8.82□□□□□ -1
VAT1-209ENST00000592388 INCENPQ9NQS7 918 aa8.82□□□□□ -1
VAT1-209ENST00000592388 GPHNQ9NQX3 736 aaPredicted RBP8.82□□□□□ -1
VAT1-209ENST00000592388 ATP8A2Q9NTI2 1148 aa8.82□□□□□ -1
VAT1-209ENST00000592388 ECHDC1Q9NTX5 307 aa8.82□□□□□ -1
VAT1-209ENST00000592388 POLR3EQ9NVU0 708 aa8.82□□□□□ -1
VAT1-209ENST00000592388 Q9Y3F1 56 aa8.82□□□□□ -1
VAT1-209ENST00000592388 TANC1Q9C0D5 1861 aa8.82□□□□□ -1
VAT1-209ENST00000592388 CEP250Q9BV73 2442 aa8.82□□□□□ -1
VAT1-209ENST00000592388 NBNO60934 754 aa8.81□□□□□ -1
VAT1-209ENST00000592388 RRP1P56182 461 aaKnown RBP8.81□□□□□ -1
VAT1-209ENST00000592388 IKBKEQ14164 716 aa8.81□□□□□ -1
VAT1-209ENST00000592388 ACAP1Q15027 740 aa8.81□□□□□ -1
VAT1-209ENST00000592388 IQSEC1Q6DN90 963 aa8.81□□□□□ -1
VAT1-209ENST00000592388 TAPT1Q6NXT6 567 aa8.81□□□□□ -1
VAT1-209ENST00000592388 KIAA1211Q6ZU35 1233 aa8.81□□□□□ -1
VAT1-209ENST00000592388 LRRC8DQ7L1W4 858 aa8.81□□□□□ -1
VAT1-209ENST00000592388 FBXO11Q86XK2 927 aa8.81□□□□□ -1
VAT1-209ENST00000592388 KBTBD3Q8NAB2 608 aa8.81□□□□□ -1
VAT1-209ENST00000592388 AFAP1L1Q8TED9 768 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms