RNA–Protein interactions for RNA: ENST00000591661.1

MBD1-226, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-226ENST00000591661 GNEQ9Y223 722 aaKnown RBP16.6■□□□□ 0.25
MBD1-226ENST00000591661 V9GY48 417 aaPredicted RBP16.6■□□□□ 0.25
MBD1-226ENST00000591661 LRRC37A2A6NM11 1700 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.59■□□□□ 0.25
MBD1-226ENST00000591661 hCG_1984214I3L0E3 225 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 MEIS2O14770 477 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 PGK1P00558 417 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 GJA9P57773 515 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 TNFAIP2Q03169 654 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 GJC2Q5T442 439 aaPredicted RBP16.59■□□□□ 0.25
MBD1-226ENST00000591661 WWC2Q6AWC2 1192 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 PPP1R18Q6NYC8 613 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 RNF180Q86T96 592 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 TEX2Q8IWB9 1127 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 ZNF713Q8N859 430 aaPredicted RBP16.59■□□□□ 0.25
MBD1-226ENST00000591661 KLHDC9Q8NEP7 349 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 PDCD2LQ9BRP1 358 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 UPF3AQ9H1J1 476 aaKnown RBP16.59■□□□□ 0.25
MBD1-226ENST00000591661 RBM27Q9P2N5 1060 aaKnown RBP16.59■□□□□ 0.25
MBD1-226ENST00000591661 GTF3C3Q9Y5Q9 886 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 SYNRGQ9UMZ2 1314 aa16.59■□□□□ 0.25
MBD1-226ENST00000591661 KBTBD13C9JR72 458 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 NR3C2P08235 984 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 IFNAR1P17181 557 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 SMPD1P17405 629 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 EIF2AK2P19525 551 aaKnown RBP16.58■□□□□ 0.24
MBD1-226ENST00000591661 CST5P28325 142 aaPredicted RBP16.58■□□□□ 0.24
MBD1-226ENST00000591661 ANKRD1Q15327 319 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 STXBP2Q15833 593 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 PFKFB3Q16875 520 aaPredicted RBP16.58■□□□□ 0.24
MBD1-226ENST00000591661 DUSP28Q4G0W2 176 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 HEATR3Q7Z4Q2 680 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 GPKOWQ92917 476 aaPredicted RBP eCLIP16.58■□□□□ 0.24
MBD1-226ENST00000591661 CUL5Q93034 780 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 TSEN34Q9BSV6 310 aaKnown RBP16.58■□□□□ 0.24
MBD1-226ENST00000591661 PSTPIP2Q9H939 334 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 SPC25Q9HBM1 224 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 BARHL2Q9NY43 387 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 Q9Y3F1 56 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 FRMPD4Q14CM0 1322 aa16.58■□□□□ 0.24
MBD1-226ENST00000591661 PRPF3O43395 683 aaKnown RBP16.57■□□□□ 0.24
MBD1-226ENST00000591661 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
MBD1-226ENST00000591661 CCT2P78371 535 aaKnown RBP16.57■□□□□ 0.24
MBD1-226ENST00000591661 CCSAPQ6IQ19 270 aaPredicted RBP16.57■□□□□ 0.24
MBD1-226ENST00000591661 TYW1BQ6NUM6 668 aa16.57■□□□□ 0.24
MBD1-226ENST00000591661 USP17L6PQ6QN14 398 aa16.57■□□□□ 0.24
MBD1-226ENST00000591661 VSIG10LQ86VR7 867 aa16.57■□□□□ 0.24
MBD1-226ENST00000591661 FCHSD1Q86WN1 690 aa16.57■□□□□ 0.24
MBD1-226ENST00000591661 SCFD2Q8WU76 684 aa16.57■□□□□ 0.24
MBD1-226ENST00000591661 LARP6Q9BRS8 491 aaKnown RBP16.57■□□□□ 0.24
MBD1-226ENST00000591661 RNF26Q9BY78 433 aaPredicted RBP16.57■□□□□ 0.24
MBD1-226ENST00000591661 WDR11Q9BZH6 1224 aa16.57■□□□□ 0.24
MBD1-226ENST00000591661 NCOA5Q9HCD5 579 aaKnown RBP16.57■□□□□ 0.24
MBD1-226ENST00000591661 PHF24Q9UPV7 400 aa16.57■□□□□ 0.24
MBD1-226ENST00000591661 STXBP3O00186 592 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 NKRFO15226 690 aaKnown RBP eCLIP16.56■□□□□ 0.24
MBD1-226ENST00000591661 CTAGE5O15320 804 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 SCG2P13521 617 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 AK2P54819 239 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 NAPAP54920 295 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 PGM5Q15124 567 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 PKN1Q16512 942 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 NOL8Q76FK4 1167 aaKnown RBP16.56■□□□□ 0.24
MBD1-226ENST00000591661 TLK2Q86UE8 772 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 SMARCC2Q8TAQ2 1214 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 SENP6Q9GZR1 1112 aaPredicted RBP16.56■□□□□ 0.24
MBD1-226ENST00000591661 TPCN1Q9ULQ1 816 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 CEP290O15078 2479 aa16.56■□□□□ 0.24
MBD1-226ENST00000591661 MYADML2A6NDP7 307 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 MOXD2PA6NHM9 499 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
MBD1-226ENST00000591661 C6orf222P0C671 652 aaPredicted RBP16.55■□□□□ 0.24
MBD1-226ENST00000591661 RBM25P49756 843 aaKnown RBP16.55■□□□□ 0.24
MBD1-226ENST00000591661 NEK4P51957 841 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 AKAP17AQ02040 695 aaKnown RBP16.55■□□□□ 0.24
MBD1-226ENST00000591661 TMEM63BQ5T3F8 832 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 CCDC62Q6P9F0 684 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 PCSK9Q8NBP7 692 aaKnown RBP16.55■□□□□ 0.24
MBD1-226ENST00000591661 IL31RAQ8NI17 732 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 DPF3Q92784 378 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 PHKBQ93100 1093 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 C22orf23Q9BZE7 217 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 GLT8D2Q9H1C3 349 aa16.55■□□□□ 0.24
MBD1-226ENST00000591661 CPLX1O14810 134 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 DYNC1LI2O43237 492 aaPredicted RBP16.54■□□□□ 0.24
MBD1-226ENST00000591661 PFKFB2O60825 505 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 ARIH2O95376 493 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 CCND2P30279 289 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 TTLL4Q14679 1199 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 GNASQ5JWF2 1037 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 CPLX2Q6PUV4 134 aaKnown RBP16.54■□□□□ 0.24
MBD1-226ENST00000591661 KIF2CQ99661 725 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 SLC26A6Q9BXS9 759 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 AP5M1Q9H0R1 490 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 RIC8AQ9NPQ8 531 aa16.54■□□□□ 0.24
MBD1-226ENST00000591661 A0A1W2PQ45 241 aaPredicted RBP16.53■□□□□ 0.24
MBD1-226ENST00000591661 A0A1W2PQY0 241 aa16.53■□□□□ 0.24
MBD1-226ENST00000591661 ESYT2A0FGR8 921 aa16.53■□□□□ 0.24
MBD1-226ENST00000591661 STAM2O75886 525 aa16.53■□□□□ 0.24
MBD1-226ENST00000591661 RGS20O76081 388 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms