RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 NFIXQ14938 502 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 ZSCAN26Q16670 478 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 ME3Q16798 604 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 PPP1R21Q6ZMI0 780 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 SP8Q8IXZ3 490 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 COA7Q96BR5 231 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 RNF26Q9BY78 433 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 SEPT9Q9UHD8 586 aaPredicted RBP14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 N4BP1O75113 896 aaKnown RBP14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 CDC25BP30305 580 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 SERTAD1Q9UHV2 236 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 CYP2J2P51589 502 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 PTCH1Q13635 1447 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 TBC1D31Q96DN5 1066 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 TRIM31Q9BZY9 425 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 ZSWIM6Q9HCJ5 1215 aa14.58□□□□□ -0.08
SMARCA4-216ENST00000591545 TROVE2P10155 538 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 ZSCAN20P17040 1043 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 RC3H1Q5TC82 1133 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 PNMA8AQ86V59 439 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 GRK7Q8WTQ7 553 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 RAB3IPQ96QF0 476 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 WRNIP1Q96S55 665 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 ANTXR1Q9H6X2 564 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 HOXC10Q9NYD6 342 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 SASH1O94885 1247 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 ANKRD20A3Q5VUR7 823 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 NUF2Q9BZD4 464 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 HESX1Q9UBX0 185 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 RGS16O15492 202 aaPredicted RBP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 KRT15P19012 456 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 RNASE9P60153 205 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 RNF10Q8N5U6 811 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 USP31Q70CQ4 1352 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 KCNJ18B7U540 433 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 SLC16A2P36021 539 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 KCNJ12Q14500 433 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 RRAGAQ7L523 313 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 MMS19Q96T76 1030 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 MIS12Q9H081 205 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 DDX41Q9UJV9 622 aaKnown RBP14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 PPP2R2CQ9Y2T4 447 aa14.57□□□□□ -0.08
SMARCA4-216ENST00000591545 MYCP01106 439 aaPredicted RBP14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 XRCC5P13010 732 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 CDK8P49336 464 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 RASA3Q14644 834 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 SH2D4BQ5SQS7 431 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 FAM71BQ8TC56 605 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 STAMQ92783 540 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 MAP4K1Q92918 833 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 NACC1Q96RE7 527 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 TDRD3Q9H7E2 651 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 CAMSAP1Q5T5Y3 1602 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 SPATA31A1Q5TZJ5 1347 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 GIPC1O14908 333 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 GEN1Q17RS7 908 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 MAGEF1Q9HAY2 307 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 MTMR6Q9Y217 621 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 LAD1O00515 517 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 PRKAB2O43741 272 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 PNOCQ13519 176 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 ARMCX5Q6P1M9 558 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 PI16Q6UXB8 463 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 ATP2A3Q93084 1043 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 BLZF1Q9H2G9 400 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 ZHX2Q9Y6X8 837 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 USP17L5A8MUK1 530 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 TLR3O15455 904 aaKnown RBP14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 STAT1P42224 750 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 TRAPPC10P48553 1259 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 TYW1BQ6NUM6 668 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 SESTD1Q86VW0 696 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 ST7Q9NRC1 585 aa14.56□□□□□ -0.08
SMARCA4-216ENST00000591545 A0A1W2PQ27 194 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 A0A1W2PQ64 194 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 A0A1W2PQD8 194 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 M0R2C6 588 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 GH2P01242 217 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 UBXN2AP68543 259 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 CYP4A11Q02928 519 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 MORC3Q14149 939 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 LONRF2Q1L5Z9 754 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 SLC16A10Q8TF71 515 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 CELF1Q92879 486 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 PANK4Q9NVE7 773 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 BTBD18B2RXH4 712 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 GSPT1P15170 499 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 CTNNA1P35221 906 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 BARGINQ6ZT62 677 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 TRMT44Q8IYL2 757 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 C1orf112Q9NSG2 853 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 PCDHA4Q9UN74 947 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 ARHGEF37A1IGU5 675 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 GTPBP6O43824 516 aaPredicted RBP14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 ABL1P00519 1130 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 LONP1P36776 959 aaKnown RBP14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 PHLDB3Q6NSJ2 640 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 DYNLL2Q96FJ2 89 aa14.55□□□□□ -0.08
SMARCA4-216ENST00000591545 PPP1R12CQ9BZL4 782 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms