RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 HOXC6P09630 235 aa21■□□□□ 0.95
CROCCP3-205ENST00000591316 ELNP15502 786 aa21■□□□□ 0.95
CROCCP3-205ENST00000591316 CLK2P49760 499 aaKnown RBP21■□□□□ 0.95
CROCCP3-205ENST00000591316 ALDH5A1P51649 535 aaPredicted RBP21■□□□□ 0.95
CROCCP3-205ENST00000591316 NR5A1Q13285 461 aa21■□□□□ 0.95
CROCCP3-205ENST00000591316 MCTP1Q6DN14 999 aa21■□□□□ 0.95
CROCCP3-205ENST00000591316 CTU1Q7Z7A3 348 aaKnown RBP21■□□□□ 0.95
CROCCP3-205ENST00000591316 DIS3L2Q8IYB7 885 aaKnown RBP21■□□□□ 0.95
CROCCP3-205ENST00000591316 ZFP91Q96JP5 570 aaPredicted RBP21■□□□□ 0.95
CROCCP3-205ENST00000591316 FGD4Q96M96 766 aa21■□□□□ 0.95
CROCCP3-205ENST00000591316 PXMP2Q9NR77 195 aa21■□□□□ 0.95
CROCCP3-205ENST00000591316 DIS3Q9Y2L1 958 aaKnown RBP21■□□□□ 0.95
CROCCP3-205ENST00000591316 PTPN22Q9Y2R2 807 aa21■□□□□ 0.95
CROCCP3-205ENST00000591316 ZNFX1Q9P2E3 1918 aaKnown RBP21■□□□□ 0.95
CROCCP3-205ENST00000591316 PLXNB2O15031 1838 aa20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 ASTN1O14525 1302 aa20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 ADCY3O60266 1144 aa20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 MYCLP12524 364 aaPredicted RBP20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 XRCC5P13010 732 aaKnown RBP20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 SYT1P21579 422 aa20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 PRMT2P55345 433 aa20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 GNL2Q13823 731 aaKnown RBP20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 FAM177A1Q8N128 213 aaPredicted RBP20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 DAGLBQ8NCG7 672 aa20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 DNERQ8NFT8 737 aa20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 PRDM10Q9NQV6 1147 aa20.99■□□□□ 0.95
CROCCP3-205ENST00000591316 VPS37CA5D8V6 355 aaPredicted RBP20.98■□□□□ 0.95
CROCCP3-205ENST00000591316 FOSP01100 380 aaPredicted RBP20.98■□□□□ 0.95
CROCCP3-205ENST00000591316 PDCP20941 246 aa20.98■□□□□ 0.95
CROCCP3-205ENST00000591316 ANO3Q9BYT9 981 aa20.98■□□□□ 0.95
CROCCP3-205ENST00000591316 CYP2C19P33261 490 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 IRF5Q13568 498 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 EEPD1Q7L9B9 569 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 TRIB2Q92519 343 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 TINF2Q9BSI4 451 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 ASB14A6NK59 587 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 M0R2N6 131 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 NR3C2P08235 984 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 AP3B2Q13367 1082 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 PGM5Q15124 567 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 PRAMEF19Q5SWL8 479 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 PIK3AP1Q6ZUJ8 805 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 PDCD2LQ9BRP1 358 aa20.97■□□□□ 0.95
CROCCP3-205ENST00000591316 CCDC194A0A1B0GVG4 234 aa20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 PDE4DQ08499 809 aa20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 EARS2Q5JPH6 523 aaKnown RBP20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 ARMCX2Q7L311 632 aa20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 ZNF467Q7Z7K2 595 aaPredicted RBP20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 IL31RAQ8NI17 732 aa20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 MPHOSPH6Q99547 160 aaKnown RBP20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 EHMT1Q9H9B1 1298 aa20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 RTEL1Q9NZ71 1219 aa20.96■□□□□ 0.95
CROCCP3-205ENST00000591316 B4DLN1 442 aa20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 GRK4P32298 578 aa20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 TRIM32Q13049 653 aa20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 FOXD4L5Q5VV16 416 aaPredicted RBP20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 OLFML2BQ68BL8 750 aa20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 MCTP2Q6DN12 878 aa20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 TBCKQ8TEA7 893 aa20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 SH3TC2Q8TF17 1288 aa20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 FOXD4L4Q8WXT5 416 aaPredicted RBP20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 IWS1Q96ST2 819 aa20.95■□□□□ 0.94
CROCCP3-205ENST00000591316 FAM205CA6NFA0 338 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 KIF28PB7ZC32 967 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 STX6O43752 255 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 SNAI1O95863 264 aaPredicted RBP20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 STXBP2Q15833 593 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 MFSD14CQ5VZR4 134 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 MAMDC4Q6UXC1 1216 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 KRT25Q7Z3Z0 450 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 TEX2Q8IWB9 1127 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 PXYLP1Q8TE99 480 aa20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 FOXP1Q9H334 677 aaPredicted RBP20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.94■□□□□ 0.94
CROCCP3-205ENST00000591316 MYCP01106 439 aaPredicted RBP20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 CCND2P30279 289 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 ZNF76P36508 570 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 NONOQ15233 471 aaKnown RBP eCLIP20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 INF2Q27J81 1249 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 FERMT3Q86UX7 667 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 VSIG10LQ86VR7 867 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 TRMT44Q8IYL2 757 aaKnown RBP20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 RPTORQ8N122 1335 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 ATP2B1P20020 1258 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 ARHGAP4P98171 946 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 PKN2Q16513 984 aaKnown RBP20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 FBXO46Q6PJ61 603 aaPredicted RBP20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 MSL3Q8N5Y2 521 aaKnown RBP20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 SLAIN1Q8ND83 568 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 TNFRSF25Q93038 417 aa20.93■□□□□ 0.94
CROCCP3-205ENST00000591316 EDNRBP24530 442 aa20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 SREBF1P36956 1147 aa20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 MRPS9P82933 396 aaKnown RBP20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 SLC9C1Q4G0N8 1177 aa20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 SEPT14Q6ZU15 432 aa20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 FBXO16Q8IX29 292 aaPredicted RBP20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 ZHX1Q9UKY1 873 aaPredicted RBP20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 MTMR6Q9Y217 621 aa20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 CNPY2Q9Y2B0 182 aa20.92■□□□□ 0.94
CROCCP3-205ENST00000591316 SYNGAP1Q96PV0 1343 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms