RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 RARBP10826 455 aa24.83■■□□□ 1.57
R3HDM4-206ENST00000590454 FCER1AP12319 257 aa24.83■■□□□ 1.57
R3HDM4-206ENST00000590454 RAG1P15918 1043 aa24.83■■□□□ 1.57
R3HDM4-206ENST00000590454 ITGB8P26012 769 aa24.83■■□□□ 1.57
R3HDM4-206ENST00000590454 RNF180Q86T96 592 aa24.83■■□□□ 1.57
R3HDM4-206ENST00000590454 FBXO11Q86XK2 927 aa24.83■■□□□ 1.57
R3HDM4-206ENST00000590454 CLEC4DQ8WXI8 215 aa24.83■■□□□ 1.57
R3HDM4-206ENST00000590454 PNMA6FA0A0J9YX94 578 aa24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 NFIBO00712 420 aa24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 KIAA0355O15063 1070 aa24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 EPHB4P54760 987 aa24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 ST3GAL1Q11201 340 aa24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 PHKBQ93100 1093 aa24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 RRP36Q96EU6 259 aaKnown RBP24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 SLKQ9H2G2 1235 aaPredicted RBP24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 V9GY48 417 aaPredicted RBP24.82■■□□□ 1.56
R3HDM4-206ENST00000590454 ZNFX1Q9P2E3 1918 aaKnown RBP24.81■■□□□ 1.56
R3HDM4-206ENST00000590454 PPP2R5BQ15173 497 aa24.81■■□□□ 1.56
R3HDM4-206ENST00000590454 CHST13Q8NET6 341 aa24.81■■□□□ 1.56
R3HDM4-206ENST00000590454 MMP19Q99542 508 aa24.81■■□□□ 1.56
R3HDM4-206ENST00000590454 VCANP13611 3396 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 CCDC196A0A1B0GTZ2 297 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 PGK2P07205 417 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 COPB2P35606 906 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 FPGSQ05932 587 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 GRIN2CQ14957 1233 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 TKFCQ3LXA3 575 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 TJAP1Q5JTD0 557 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 AMNQ9BXJ7 453 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 ACAD9Q9H845 621 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 LIMCH1Q9UPQ0 1083 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 PCDHA1Q9Y5I3 950 aa24.8■■□□□ 1.56
R3HDM4-206ENST00000590454 OPLAHO14841 1288 aa24.79■■□□□ 1.56
R3HDM4-206ENST00000590454 PQBP1O60828 265 aaKnown RBP24.79■■□□□ 1.56
R3HDM4-206ENST00000590454 PGK1P00558 417 aa24.79■■□□□ 1.56
R3HDM4-206ENST00000590454 TBC1D5Q92609 795 aa24.79■■□□□ 1.56
R3HDM4-206ENST00000590454 A1CFQ9NQ94 594 aaKnown RBP24.79■■□□□ 1.56
R3HDM4-206ENST00000590454 TMEM39AQ9NV64 488 aa24.79■■□□□ 1.56
R3HDM4-206ENST00000590454 A0A1W2PQ45 241 aaPredicted RBP24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 A0A1W2PQY0 241 aa24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 CTDNEP1O95476 244 aa24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 IFNAR1P17181 557 aa24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.78■■□□□ 1.566e-6■■□□□ 13.4
R3HDM4-206ENST00000590454 GPKOWQ92917 476 aaPredicted RBP eCLIP24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 TINF2Q9BSI4 451 aa24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 SEC63Q9UGP8 760 aaKnown RBP24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 FBXO40Q9UH90 709 aa24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 DIS3Q9Y2L1 958 aaKnown RBP24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 ABCB11O95342 1321 aa24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 EYSQ5T1H1 3165 aa24.78■■□□□ 1.56
R3HDM4-206ENST00000590454 ST18O60284 1047 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 DNAJB2P25686 324 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 KCTD2Q14681 263 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 PKN1Q16512 942 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 NSMFQ6X4W1 530 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 ANKRD35Q8N283 1001 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 GTF3C6Q969F1 213 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 TOX2Q96NM4 488 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 PURBQ96QR8 312 aaKnown RBP24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 SLC26A6Q9BXS9 759 aa24.77■■□□□ 1.56
R3HDM4-206ENST00000590454 TNFRSF10AO00220 468 aa24.76■■□□□ 1.55
R3HDM4-206ENST00000590454 AKR1A1P14550 325 aa24.76■■□□□ 1.55
R3HDM4-206ENST00000590454 WWC2Q6AWC2 1192 aa24.76■■□□□ 1.55
R3HDM4-206ENST00000590454 SLC30A10Q6XR72 485 aa24.76■■□□□ 1.55
R3HDM4-206ENST00000590454 TSEN34Q9BSV6 310 aaKnown RBP24.76■■□□□ 1.55
R3HDM4-206ENST00000590454 ZNF576Q9H609 170 aa24.76■■□□□ 1.55
R3HDM4-206ENST00000590454 PNMA2Q9UL42 364 aa24.76■■□□□ 1.55
R3HDM4-206ENST00000590454 LCTP09848 1927 aa24.76■■□□□ 1.55
R3HDM4-206ENST00000590454 DNAJC25-GNG10A0A024R161 153 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 DCDC2CA8MYV0 355 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 CPLX1O14810 134 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 PRPF3O43395 683 aaKnown RBP24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 CNTN2Q02246 1040 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 FAAP100Q0VG06 881 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 BAATQ14032 418 aaPredicted RBP24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 TYW1BQ6NUM6 668 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 ANKRD33Q7Z3H0 272 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 HEATR3Q7Z4Q2 680 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 USP38Q8NB14 1042 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 FGD4Q96M96 766 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 CYP39A1Q9NYL5 469 aa24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 MRPL11Q9Y3B7 192 aaKnown RBP24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 SPTBN5Q9NRC6 3674 aaKnown RBP24.75■■□□□ 1.55
R3HDM4-206ENST00000590454 ZNF865P0CJ78 1059 aaPredicted RBP24.74■■□□□ 1.55
R3HDM4-206ENST00000590454 ZNF792Q3KQV3 632 aa24.74■■□□□ 1.55
R3HDM4-206ENST00000590454 TIFAQ96CG3 184 aa24.74■■□□□ 1.55
R3HDM4-206ENST00000590454 DDX11Q96FC9 970 aa24.74■■□□□ 1.55
R3HDM4-206ENST00000590454 STARD7Q9NQZ5 370 aa24.74■■□□□ 1.55
R3HDM4-206ENST00000590454 PLXNA1Q9UIW2 1896 aa24.74■■□□□ 1.55
R3HDM4-206ENST00000590454 ASTN1O14525 1302 aa24.73■■□□□ 1.55
R3HDM4-206ENST00000590454 PTPDC1A2A3K4 754 aa24.73■■□□□ 1.55
R3HDM4-206ENST00000590454 PFKFB3Q16875 520 aaPredicted RBP24.73■■□□□ 1.55
R3HDM4-206ENST00000590454 CCDC83Q8IWF9 413 aa24.73■■□□□ 1.55
R3HDM4-206ENST00000590454 RNF26Q9BY78 433 aaPredicted RBP24.73■■□□□ 1.55
R3HDM4-206ENST00000590454 CNPY2Q9Y2B0 182 aa24.73■■□□□ 1.55
R3HDM4-206ENST00000590454 DDX49Q9Y6V7 483 aaKnown RBP24.73■■□□□ 1.55
R3HDM4-206ENST00000590454 STXBP3O00186 592 aa24.72■■□□□ 1.55
R3HDM4-206ENST00000590454 JAK2O60674 1132 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms