RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 ABCB11O95342 1321 aa21.04■□□□□ 0.96
H3F3B-209ENST00000589949 MYL3P08590 195 aa21.04■□□□□ 0.96
H3F3B-209ENST00000589949 CYP21A2P08686 494 aa21.04■□□□□ 0.96
H3F3B-209ENST00000589949 PARP1P09874 1014 aaKnown RBP21.04■□□□□ 0.96
H3F3B-209ENST00000589949 GRIN2CQ14957 1233 aa21.04■□□□□ 0.96
H3F3B-209ENST00000589949 PPP2R5BQ15173 497 aa21.04■□□□□ 0.96
H3F3B-209ENST00000589949 CCDC62Q6P9F0 684 aa21.04■□□□□ 0.96
H3F3B-209ENST00000589949 SCFD2Q8WU76 684 aa21.04■□□□□ 0.96
H3F3B-209ENST00000589949 UBAC1Q9BSL1 405 aa21.04■□□□□ 0.96
H3F3B-209ENST00000589949 A6NJR5 290 aa21.03■□□□□ 0.96
H3F3B-209ENST00000589949 TXNP10599 105 aaKnown RBP21.03■□□□□ 0.96
H3F3B-209ENST00000589949 CYP2C9P11712 490 aa21.03■□□□□ 0.96
H3F3B-209ENST00000589949 IFIT1BQ5T764 474 aaKnown RBP21.03■□□□□ 0.96
H3F3B-209ENST00000589949 MTMR8Q96EF0 704 aa21.03■□□□□ 0.96
H3F3B-209ENST00000589949 PBX4Q9BYU1 374 aa21.03■□□□□ 0.96
H3F3B-209ENST00000589949 MAD2L2Q9UI95 211 aa21.03■□□□□ 0.96
H3F3B-209ENST00000589949 CPT1AP50416 773 aa21.02■□□□□ 0.96
H3F3B-209ENST00000589949 NBPF20Q3BBV1 942 aa21.02■□□□□ 0.96
H3F3B-209ENST00000589949 STOX1Q6ZVD7 989 aa21.02■□□□□ 0.96
H3F3B-209ENST00000589949 FBXO11Q86XK2 927 aa21.02■□□□□ 0.96
H3F3B-209ENST00000589949 HERVK_113Q902F9 699 aa21.02■□□□□ 0.96
H3F3B-209ENST00000589949 SCLYQ96I15 445 aa21.02■□□□□ 0.96
H3F3B-209ENST00000589949 MTG1Q9BT17 334 aaPredicted RBP21.02■□□□□ 0.96
H3F3B-209ENST00000589949 POLR3EQ9NVU0 708 aa21.02■□□□□ 0.96
H3F3B-209ENST00000589949 SCN10AQ9Y5Y9 1956 aa21.02■□□□□ 0.96
H3F3B-209ENST00000589949 RAD50Q92878 1312 aa21.02■□□□□ 0.95
H3F3B-209ENST00000589949 TMEM265A0A087WTH1 108 aa21.01■□□□□ 0.95
H3F3B-209ENST00000589949 KLRF2D3W0D1 207 aa21.01■□□□□ 0.95
H3F3B-209ENST00000589949 RBAK-RBAKDNI3L0D1 243 aa21.01■□□□□ 0.95
H3F3B-209ENST00000589949 DHX16O60231 1041 aaKnown RBP21.01■□□□□ 0.95
H3F3B-209ENST00000589949 LY6KQ17RY6 165 aa21.01■□□□□ 0.95
H3F3B-209ENST00000589949 PSRC1Q6PGN9 363 aaPredicted RBP21.01■□□□□ 0.95
H3F3B-209ENST00000589949 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.01■□□□□ 0.95
H3F3B-209ENST00000589949 MAFAQ8NHW3 353 aaPredicted RBP21.01■□□□□ 0.95
H3F3B-209ENST00000589949 SEZ6LQ9BYH1 1024 aa21.01■□□□□ 0.95
H3F3B-209ENST00000589949 PALM3A6NDB9 673 aaPredicted RBP21■□□□□ 0.95
H3F3B-209ENST00000589949 NKRFO15226 690 aaKnown RBP eCLIP21■□□□□ 0.953e-7■■□□□ 11.7
H3F3B-209ENST00000589949 SEPT14Q6ZU15 432 aa21■□□□□ 0.95
H3F3B-209ENST00000589949 NSUN6Q8TEA1 469 aaKnown RBP21■□□□□ 0.95
H3F3B-209ENST00000589949 TIFAQ96CG3 184 aa21■□□□□ 0.95
H3F3B-209ENST00000589949 RMDN3Q96TC7 470 aa21■□□□□ 0.95
H3F3B-209ENST00000589949 ZNF576Q9H609 170 aa21■□□□□ 0.95
H3F3B-209ENST00000589949 CHD7Q9P2D1 2997 aa21■□□□□ 0.95
H3F3B-209ENST00000589949 SGSM2O43147 1006 aa20.99■□□□□ 0.95
H3F3B-209ENST00000589949 FGBP02675 491 aa20.99■□□□□ 0.95
H3F3B-209ENST00000589949 HSD17B4P51659 736 aa20.99■□□□□ 0.95
H3F3B-209ENST00000589949 ARHGAP1Q07960 439 aa20.99■□□□□ 0.95
H3F3B-209ENST00000589949 CHST3Q7LGC8 479 aa20.99■□□□□ 0.95
H3F3B-209ENST00000589949 OTOP2Q7RTS6 562 aa20.99■□□□□ 0.95
H3F3B-209ENST00000589949 AFG1LQ8WV93 481 aa20.99■□□□□ 0.95
H3F3B-209ENST00000589949 MAF1Q9H063 256 aa20.99■□□□□ 0.95
H3F3B-209ENST00000589949 MRPL11Q9Y3B7 192 aaKnown RBP20.99■□□□□ 0.95
H3F3B-209ENST00000589949 MYH6P13533 1939 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 E7EWF7 191 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 CYTH3O43739 400 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 CFBP00751 764 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 FOSL2P15408 326 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 EIF2AK2P19525 551 aaKnown RBP20.98■□□□□ 0.95
H3F3B-209ENST00000589949 ANTXR2P58335 489 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 GHRHRQ02643 423 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 COL9A3Q14050 684 aaPredicted RBP20.98■□□□□ 0.95
H3F3B-209ENST00000589949 TTLL4Q14679 1199 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 MCF2L2Q86YR7 1114 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 CTAGE1Q96RT6 745 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 MPHOSPH6Q99547 160 aaKnown RBP20.98■□□□□ 0.95
H3F3B-209ENST00000589949 AMNQ9BXJ7 453 aa20.98■□□□□ 0.95
H3F3B-209ENST00000589949 GPHNQ9NQX3 736 aaPredicted RBP20.98■□□□□ 0.95
H3F3B-209ENST00000589949 B4DLN1 442 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 ZBTB5O15062 677 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 MRPL12P52815 198 aaKnown RBP20.97■□□□□ 0.95
H3F3B-209ENST00000589949 GRM4Q14833 912 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 FAM47CQ5HY64 1035 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 RUFY2Q8WXA3 655 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 KAT2BQ92831 832 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 IWS1Q96ST2 819 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 COL25A1Q9BXS0 654 aaPredicted RBP20.97■□□□□ 0.95
H3F3B-209ENST00000589949 PXMP2Q9NR77 195 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 YBX2Q9Y2T7 364 aaKnown RBP20.97■□□□□ 0.95
H3F3B-209ENST00000589949 U3KPZ7 1027 aaPredicted RBP20.97■□□□□ 0.95
H3F3B-209ENST00000589949 CUL9Q8IWT3 2517 aa20.97■□□□□ 0.95
H3F3B-209ENST00000589949 SCN5AQ14524 2016 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 IFIT3O14879 490 aaKnown RBP20.96■□□□□ 0.95
H3F3B-209ENST00000589949 RGS20O76081 388 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 NR3C2P08235 984 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 MMP3P08254 477 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 HOXA13P31271 388 aaPredicted RBP20.96■□□□□ 0.95
H3F3B-209ENST00000589949 TROAPQ12815 778 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 STXBP2Q15833 593 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 ARHGEF16Q5VV41 709 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 NFRKBQ6P4R8 1299 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 USP38Q8NB14 1042 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 IL31RAQ8NI17 732 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 MAP4K1Q92918 833 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 PIGSQ96S52 555 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 RIOX1Q9H6W3 641 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 DDX41Q9UJV9 622 aaKnown RBP20.96■□□□□ 0.95
H3F3B-209ENST00000589949 PCDHA1Q9Y5I3 950 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 KIAA1217Q5T5P2 1943 aa20.96■□□□□ 0.95
H3F3B-209ENST00000589949 KPNA6O60684 536 aa20.95■□□□□ 0.94
H3F3B-209ENST00000589949 SUPT20HL2P0C7V6 817 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms