RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 RAD50Q92878 1312 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 A6NJR5 290 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 NKRFO15226 690 aaKnown RBP eCLIP27.78■■■□□ 2.04
LSM7-205ENST00000589532 GRIN2CQ14957 1233 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 QRICH1Q2TAL8 776 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 TTC22Q5TAA0 569 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 OR6J1Q8NGC5 347 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 TBC1D5Q92609 795 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 KRT23Q9C075 422 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 CXXC1Q9P0U4 656 aaPredicted RBP27.78■■■□□ 2.04
LSM7-205ENST00000589532 CTNNA3Q9UI47 895 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 TRANK1O15050 2925 aa27.78■■■□□ 2.04
LSM7-205ENST00000589532 GRXCR1A8MXD5 290 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 FOSL2P15408 326 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 PBX2P40425 430 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 SEC23AQ15436 765 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 SYTL5Q8TDW5 730 aaPredicted RBP27.77■■■□□ 2.04
LSM7-205ENST00000589532 COPS5Q92905 334 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 TIFAQ96CG3 184 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 CNNM2Q9H8M5 875 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 JMJD4Q9H9V9 463 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 TRMT13Q9NUP7 481 aaKnown RBP27.77■■■□□ 2.04
LSM7-205ENST00000589532 TTC28Q96AY4 2481 aa27.77■■■□□ 2.04
LSM7-205ENST00000589532 MUC3AQ02505 3323 aa27.76■■■□□ 2.03
LSM7-205ENST00000589532 CCDC62Q6P9F0 684 aa27.76■■■□□ 2.03
LSM7-205ENST00000589532 MPHOSPH6Q99547 160 aaKnown RBP27.76■■■□□ 2.03
LSM7-205ENST00000589532 MTG1Q9BT17 334 aaPredicted RBP27.76■■■□□ 2.03
LSM7-205ENST00000589532 CCL23P55773 120 aa27.75■■■□□ 2.03
LSM7-205ENST00000589532 GHRHRQ02643 423 aa27.75■■■□□ 2.03
LSM7-205ENST00000589532 COL25A1Q9BXS0 654 aaPredicted RBP27.75■■■□□ 2.03
LSM7-205ENST00000589532 ZNF576Q9H609 170 aa27.75■■■□□ 2.03
LSM7-205ENST00000589532 SCN5AQ14524 2016 aa27.74■■■□□ 2.03
LSM7-205ENST00000589532 OPLAHO14841 1288 aa27.74■■■□□ 2.03
LSM7-205ENST00000589532 MYL3P08590 195 aa27.74■■■□□ 2.03
LSM7-205ENST00000589532 PARP1P09874 1014 aaKnown RBP27.74■■■□□ 2.03
LSM7-205ENST00000589532 CYB5R4Q7L1T6 521 aa27.74■■■□□ 2.03
LSM7-205ENST00000589532 MTMR8Q96EF0 704 aa27.74■■■□□ 2.03
LSM7-205ENST00000589532 TXNP10599 105 aaKnown RBP27.73■■■□□ 2.03
LSM7-205ENST00000589532 STAG2Q8N3U4 1231 aa27.73■■■□□ 2.03
LSM7-205ENST00000589532 TAAR1Q96RJ0 339 aa27.73■■■□□ 2.03
LSM7-205ENST00000589532 UBAC1Q9BSL1 405 aa27.73■■■□□ 2.03
LSM7-205ENST00000589532 REV3LO60673 3130 aa27.73■■■□□ 2.03
LSM7-205ENST00000589532 CYP2C9P11712 490 aa27.72■■■□□ 2.03
LSM7-205ENST00000589532 TTLL4Q14679 1199 aa27.72■■■□□ 2.03
LSM7-205ENST00000589532 SLC35G1Q2M3R5 365 aa27.72■■■□□ 2.03
LSM7-205ENST00000589532 IFIT1BQ5T764 474 aaKnown RBP27.72■■■□□ 2.03
LSM7-205ENST00000589532 SCLYQ96I15 445 aa27.72■■■□□ 2.03
LSM7-205ENST00000589532 B4DLN1 442 aa27.71■■■□□ 2.03
LSM7-205ENST00000589532 PPP1R11O60927 126 aaPredicted RBP27.71■■■□□ 2.03
LSM7-205ENST00000589532 FGBP02675 491 aa27.71■■■□□ 2.03
LSM7-205ENST00000589532 MRPL12P52815 198 aaKnown RBP27.71■■■□□ 2.03
LSM7-205ENST00000589532 NBPF20Q3BBV1 942 aa27.71■■■□□ 2.03
LSM7-205ENST00000589532 NFRKBQ6P4R8 1299 aa27.71■■■□□ 2.03
LSM7-205ENST00000589532 FBXO11Q86XK2 927 aa27.71■■■□□ 2.03
LSM7-205ENST00000589532 NSUN6Q8TEA1 469 aaKnown RBP27.71■■■□□ 2.03
LSM7-205ENST00000589532 MAD2L2Q9UI95 211 aa27.71■■■□□ 2.03
LSM7-205ENST00000589532 CYP21A2P08686 494 aa27.7■■■□□ 2.02
LSM7-205ENST00000589532 SUPT20HL2P0C7V6 817 aa27.7■■■□□ 2.02
LSM7-205ENST00000589532 HSD17B4P51659 736 aa27.7■■■□□ 2.02
LSM7-205ENST00000589532 ARHGAP1Q07960 439 aa27.7■■■□□ 2.02
LSM7-205ENST00000589532 MCF2L2Q86YR7 1114 aa27.7■■■□□ 2.02
LSM7-205ENST00000589532 MRPL11Q9Y3B7 192 aaKnown RBP27.7■■■□□ 2.02
LSM7-205ENST00000589532 TAF6LQ9Y6J9 622 aa27.7■■■□□ 2.02
LSM7-205ENST00000589532 KPNA6O60684 536 aa27.69■■■□□ 2.02
LSM7-205ENST00000589532 PTH1RQ03431 593 aa27.69■■■□□ 2.02
LSM7-205ENST00000589532 PTPN11Q06124 597 aaPredicted RBP27.69■■■□□ 2.02
LSM7-205ENST00000589532 BRDTQ58F21 947 aaPredicted RBP27.69■■■□□ 2.02
LSM7-205ENST00000589532 OTOP2Q7RTS6 562 aa27.69■■■□□ 2.02
LSM7-205ENST00000589532 USP38Q8NB14 1042 aa27.69■■■□□ 2.02
LSM7-205ENST00000589532 PPP1R13LQ8WUF5 828 aa27.69■■■□□ 2.02
LSM7-205ENST00000589532 IWS1Q96ST2 819 aa27.69■■■□□ 2.02
LSM7-205ENST00000589532 RMDN3Q96TC7 470 aa27.69■■■□□ 2.02
LSM7-205ENST00000589532 MTIF3Q9H2K0 278 aaKnown RBP27.69■■■□□ 2.02
LSM7-205ENST00000589532 YBX2Q9Y2T7 364 aaKnown RBP27.69■■■□□ 2.02
LSM7-205ENST00000589532 PALM3A6NDB9 673 aaPredicted RBP27.68■■■□□ 2.02
LSM7-205ENST00000589532 MMP3P08254 477 aa27.68■■■□□ 2.02
LSM7-205ENST00000589532 CHMLP26374 656 aa27.68■■■□□ 2.02
LSM7-205ENST00000589532 RAB30Q15771 203 aa27.68■■■□□ 2.02
LSM7-205ENST00000589532 CTAGE1Q96RT6 745 aa27.68■■■□□ 2.02
LSM7-205ENST00000589532 GPHNQ9NQX3 736 aaPredicted RBP27.68■■■□□ 2.02
LSM7-205ENST00000589532 PFKMP08237 780 aa27.67■■■□□ 2.02
LSM7-205ENST00000589532 AMNQ9BXJ7 453 aa27.67■■■□□ 2.02
LSM7-205ENST00000589532 VAT1LQ9HCJ6 419 aa27.67■■■□□ 2.02
LSM7-205ENST00000589532 PXMP2Q9NR77 195 aa27.67■■■□□ 2.02
LSM7-205ENST00000589532 KLRF2D3W0D1 207 aa27.66■■■□□ 2.02
LSM7-205ENST00000589532 PITPNM1O00562 1244 aa27.66■■■□□ 2.02
LSM7-205ENST00000589532 DHX16O60231 1041 aaKnown RBP27.66■■■□□ 2.02
LSM7-205ENST00000589532 STXBP2Q15833 593 aa27.66■■■□□ 2.02
LSM7-205ENST00000589532 LY6KQ17RY6 165 aa27.66■■■□□ 2.02
LSM7-205ENST00000589532 RPUSD2Q8IZ73 545 aaKnown RBP27.66■■■□□ 2.02
LSM7-205ENST00000589532 AFG1LQ8WV93 481 aa27.66■■■□□ 2.02
LSM7-205ENST00000589532 KAT2BQ92831 832 aa27.66■■■□□ 2.02
LSM7-205ENST00000589532 EMID1Q96A84 441 aaPredicted RBP27.66■■■□□ 2.02
LSM7-205ENST00000589532 SENP2Q9HC62 589 aa27.66■■■□□ 2.02
LSM7-205ENST00000589532 ZBTB5O15062 677 aa27.65■■■□□ 2.02
LSM7-205ENST00000589532 GH1P01241 217 aa27.65■■■□□ 2.02
LSM7-205ENST00000589532 EIF2AK2P19525 551 aaKnown RBP27.65■■■□□ 2.02
LSM7-205ENST00000589532 GRM4Q14833 912 aa27.65■■■□□ 2.02
LSM7-205ENST00000589532 FAM47CQ5HY64 1035 aa27.65■■■□□ 2.02
LSM7-205ENST00000589532 SEPT14Q6ZU15 432 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms