RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 LIFRP42702 1097 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 SLC1A4P43007 532 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 OAZ1P54368 228 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 TNFAIP2Q03169 654 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 ZNF543Q08ER8 600 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 TROAPQ12815 778 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 ADGRE1Q14246 886 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
TOMM40-204ENST00000589253 SLC35G1Q2M3R5 365 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 OTOP2Q7RTS6 562 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 SGMS1Q86VZ5 419 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 CCDC144CPQ8IYA2 1237 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 AP5M1Q9H0R1 490 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 RAVER2Q9HCJ3 691 aaKnown RBP13.57□□□□□ -0.24
TOMM40-204ENST00000589253 CXXC1Q9P0U4 656 aaPredicted RBP13.57□□□□□ -0.24
TOMM40-204ENST00000589253 FEM1BQ9UK73 627 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 SLC4A7Q9Y6M7 1214 aa13.57□□□□□ -0.24
TOMM40-204ENST00000589253 ZBBXA8MT70 800 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 ADCY6O43306 1168 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 GTPBP6O43824 516 aaPredicted RBP13.56□□□□□ -0.24
TOMM40-204ENST00000589253 EIF5BO60841 1220 aaKnown RBP13.56□□□□□ -0.24
TOMM40-204ENST00000589253 CD4P01730 458 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
TOMM40-204ENST00000589253 GOLGA8HP0CJ92 632 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 PSMA5P28066 241 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
TOMM40-204ENST00000589253 ITGA7Q13683 1181 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 TOB2Q14106 344 aaPredicted RBP13.56□□□□□ -0.24
TOMM40-204ENST00000589253 GRM4Q14833 912 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 CCDC96Q2M329 555 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 Q6ZUG5 572 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 RUFY3Q7L099 469 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.245e-8■■□□□ 14.1
TOMM40-204ENST00000589253 TLK2Q86UE8 772 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 RAB11FIP4Q86YS3 637 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 STAG2Q8N3U4 1231 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 FBXL16Q8N461 479 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 CPVLQ9H3G5 476 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 SLC38A10Q9HBR0 1119 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 HOMER2Q9NSB8 354 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 BRPF3Q9ULD4 1205 aa13.56□□□□□ -0.24
TOMM40-204ENST00000589253 ERICH2A1L162 156 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 ASB14A6NK59 587 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 TMEM232C9JQI7 657 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 PLA2G6O60733 806 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 FDX1P10109 184 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 RXRAP19793 462 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 SLC16A2P36021 539 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 CCL23P55773 120 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
TOMM40-204ENST00000589253 BEX3Q00994 111 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 FSCN1Q16658 493 aaKnown RBP13.55□□□□□ -0.24
TOMM40-204ENST00000589253 CXCL17Q6UXB2 119 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 BTNL9Q6UXG8 535 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 ACAD9Q9H845 621 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 GPCPD1Q9NPB8 672 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 MAD2L2Q9UI95 211 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 YBX2Q9Y2T7 364 aaKnown RBP13.55□□□□□ -0.24
TOMM40-204ENST00000589253 HCN4Q9Y3Q4 1203 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 PCDHA11Q9Y5I1 949 aa13.55□□□□□ -0.24
TOMM40-204ENST00000589253 CHD9Q3L8U1 2897 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 PALM3A6NDB9 673 aaPredicted RBP13.54□□□□□ -0.24
TOMM40-204ENST00000589253 DDAH1O94760 285 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 STAT2P52630 851 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 RABGGTBP53611 331 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 IKQ13123 557 aaPredicted RBP13.54□□□□□ -0.24
TOMM40-204ENST00000589253 APOA5Q6Q788 366 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 BRF1Q92994 677 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 TBC1D32Q96NH3 1257 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 PRR12Q9ULL5 1215 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 CYP46A1Q9Y6A2 500 aa13.54□□□□□ -0.24
TOMM40-204ENST00000589253 GBF1Q92538 1859 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 PFKMP08237 780 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 PARP1P09874 1014 aaKnown RBP13.53□□□□□ -0.24
TOMM40-204ENST00000589253 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
TOMM40-204ENST00000589253 SNAP25P60880 206 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 NKX3-2P78367 333 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 ASPRV1Q53RT3 343 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 SYDE2Q5VT97 1194 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 CATIPQ7Z7H3 387 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 FAM160B2Q86V87 743 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 SLC43A3Q8NBI5 491 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
TOMM40-204ENST00000589253 NOC4LQ9BVI4 516 aaKnown RBP13.53□□□□□ -0.24
TOMM40-204ENST00000589253 UBA5Q9GZZ9 404 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 ZNF536O15090 1300 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 NID2Q14112 1375 aa13.53□□□□□ -0.24
TOMM40-204ENST00000589253 KLF18A0A0U1RQI7 1052 aa13.52□□□□□ -0.25
TOMM40-204ENST00000589253 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.52□□□□□ -0.25
TOMM40-204ENST00000589253 CCDC69A6NI79 296 aa13.52□□□□□ -0.25
TOMM40-204ENST00000589253 DYNC1LI2O43237 492 aaPredicted RBP13.52□□□□□ -0.25
TOMM40-204ENST00000589253 CYTH3O43739 400 aa13.52□□□□□ -0.25
TOMM40-204ENST00000589253 B4GALT4O60513 344 aa13.52□□□□□ -0.25
TOMM40-204ENST00000589253 SUPT20HL2P0C7V6 817 aa13.52□□□□□ -0.25
TOMM40-204ENST00000589253 ACTN1P12814 892 aa13.52□□□□□ -0.25
TOMM40-204ENST00000589253 CNTN2Q02246 1040 aa13.52□□□□□ -0.25
TOMM40-204ENST00000589253 TKFCQ3LXA3 575 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms